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GENE CARD

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Gene Card

Best human hits

TNS1; TNS2; TNS3

Species

B.schlosseri

Unique Gene ID

Boschl.g00057641

Gene Model ID

Boschl.CG.Botznik2013.chr12.g57641

Location

chr12:6031438..6047009

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr12.g57641.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
SH2 ProSiteProfiles SH2 domain
Tensin_like_SH2 CDD Tensin-like, SH2 domain
SH2_dom_sf SUPERFAMILY SH2 domain superfamily
SH2_dom_sf Gene3D SH2 domain superfamily
PTB Pfam Tensin/EPS8 phosphotyrosine-binding domain
PH-like_dom_sf Gene3D PH-like domain superfamily
Tensin_PTB CDD Tensin, phosphotyrosine-binding domain
SH2 Pfam SH2 domain
SH2 SMART SH2 domain
PTB/PI_dom SMART PTB/PI domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 344 7.55e-105
actin binding Hs molecular function 344 7.55e-105
phosphoprotein phosphatase activity Hs molecular function 303 3.63e-91
protein binding Hs molecular function 344 7.55e-105
intracellular Hs cellular component 344 7.55e-105
cytoplasm Hs cellular component 344 7.55e-105
cytosol Hs cellular component 335 3.41e-102
cytoskeleton Hs cellular component 344 7.55e-105
plasma membrane Hs cellular component 303 3.63e-91
focal adhesion Hs cellular component 344 7.55e-105
cell surface Hs cellular component 344 7.55e-105
membrane Hs cellular component 303 3.63e-91
hydrolase activity Hs molecular function 303 3.63e-91
kinase binding Hs molecular function 303 3.63e-91
cell junction Hs cellular component 344 7.55e-105
cell-substrate junction Hs cellular component 344 7.55e-105
metal ion binding Hs molecular function 303 3.63e-91

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 7.8E-29