Aniseed - Gene card

Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

GBX2; HMX1; VSX2

Species

B.schlosseri

Unique Gene ID

Boschl.g00008178

Gene Model ID

Boschl.CG.Botznik2013.chr12.g08178

Location

chr12:12581815..12591327

Transcript Models and Sequences

Boschl.CG.Botznik2013.chr12.g08178.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	CDD	Homeobox domain
Homeobox_dom	ProSiteProfiles	Homeobox domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	42.7	1.34e-04
RNA polymerase II core promoter sequence-specific DNA binding	Hs	molecular function	42.7	1.34e-04
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	42.7	1.34e-04
transcriptional activator activity, RNA polymerase II transcription factor binding	Hs	molecular function	42.7	1.34e-04
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	42.4	1.63e-04
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	42.7	1.34e-04
DNA binding	Hs	molecular function	42.7	1.34e-04
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	42.7	1.34e-04
nucleus	Hs	cellular component	42.7	1.34e-04
sequence-specific DNA binding	Hs	molecular function	42.7	1.34e-04

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
DNA binding	CDD	molecular function	1.79817E-5