Aniseed - Gene card

Gene Card

Best human hits

RBPJ; RBPJL

Species

B.schlosseri

Unique Gene ID

Boschl.g00004704

Gene Model ID

Boschl.CG.Botznik2013.chr12.g04704

Location

chr12:11847912..11849442

Transcript Models and Sequences

Boschl.CG.Botznik2013.chr12.g04704.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
RBP-J/Cbf11/Cbf12_DNA-bd	Pfam	RBP-J/Cbf11/Cbf12, DNA binding
p53-like_TF_DNA-bd	SUPERFAMILY	p53-like transcription factor, DNA-binding
BTD_sf	SUPERFAMILY	Beta-trefoil domain superfamily
RBP-J/Cbf11/Cbf12_DNA-bd_sf	Gene3D	RBP-J/Cbf11/Cbf12, DNA binding domain superfamily
Beta-trefoil_DNA-bd_dom	Pfam	Beta-trefoil DNA-binding domain
RBP-J/Cbf11/Cbf12_DNA-bd	SMART	RBP-J/Cbf11/Cbf12, DNA binding
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Beta-trefoil_DNA-bd_dom	SMART	Beta-trefoil DNA-binding domain
Ig_E-set	SUPERFAMILY	Immunoglobulin E-set

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

67 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
recombinase activity	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
RNA polymerase II repressing transcription factor binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
angiogenesis	Hs	biological process
somitogenesis	Hs	biological process
epithelial to mesenchymal transition	Hs	biological process
MAML1-RBP-Jkappa- ICN1 complex	Hs	cellular component
outflow tract morphogenesis	Hs	biological process
endocardium development	Hs	biological process
endocardium morphogenesis	Hs	biological process
ventricular trabecula myocardium morphogenesis	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
DNA recombination	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
humoral immune response	Hs	biological process
Notch signaling pathway	Hs	biological process
positive regulation of transcription of Notch receptor target	Hs	biological process
heart development	Hs	biological process
transcription factor binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
epidermal cell fate specification	Hs	biological process
regulation of gene expression	Hs	biological process
positive regulation of gene expression	Hs	biological process
transcriptional repressor complex	Hs	cellular component
pituitary gland development	Hs	biological process
hemopoiesis	Hs	biological process
neuron differentiation	Hs	biological process
B cell differentiation	Hs	biological process
keratinocyte differentiation	Hs	biological process
negative regulation of ossification	Hs	biological process
positive regulation of BMP signaling pathway	Hs	biological process
somatic stem cell population maintenance	Hs	biological process
dorsal aorta morphogenesis	Hs	biological process
atrioventricular canal development	Hs	biological process
regulation of cell proliferation	Hs	biological process
defense response to bacterium	Hs	biological process
myeloid dendritic cell differentiation	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
cell fate commitment	Hs	biological process
negative regulation of cell differentiation	Hs	biological process
positive regulation of Notch signaling pathway	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein N-terminus binding	Hs	molecular function
regulation of timing of cell differentiation	Hs	biological process
artery morphogenesis	Hs	biological process
arterial endothelial cell fate commitment	Hs	biological process
repressing transcription factor binding	Hs	molecular function
blood vessel lumenization	Hs	biological process
blood vessel endothelial cell fate specification	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
recombinase activity	Hs	molecular function	712	0.0
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	466	1.02e-160
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	712	0.0
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	712	0.0
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	712	0.0
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	712	0.0
RNA polymerase II repressing transcription factor binding	Hs	molecular function	712	0.0
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	712	0.0
MAML1-RBP-Jkappa- ICN1 complex	Hs	cellular component	712	0.0
DNA binding	Hs	molecular function	712	0.0
chromatin binding	Hs	molecular function	712	0.0
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	712	0.0
protein binding	Hs	molecular function	712	0.0
nucleus	Hs	cellular component	712	0.0
nucleoplasm	Hs	cellular component	712	0.0
transcription factor complex	Hs	cellular component	712	0.0
nucleolus	Hs	cellular component	712	0.0
cytoplasm	Hs	cellular component	712	0.0
transcription factor binding	Hs	molecular function	712	0.0
transcriptional repressor complex	Hs	cellular component	712	0.0
sequence-specific DNA binding	Hs	molecular function	712	0.0
protein N-terminus binding	Hs	molecular function	712	0.0
repressing transcription factor binding	Hs	molecular function	712	0.0

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	SMART	molecular function	9.4E-88
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	SMART	molecular function	9.4E-88
DNA binding	Gene3D	molecular function	8.6E-158
transcription factor activity, sequence-specific DNA binding	Gene3D	molecular function	8.6E-158
nucleus	Gene3D	cellular component	8.6E-158
regulation of transcription, DNA-templated	Gene3D	biological process	8.6E-158