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GENE CARD

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Gene Card

Best human hits

TUBA1A; TUBA3C; TUBA3D

Species

B.schlosseri

Unique Gene ID

Boschl.g00057586

Gene Model ID

Boschl.CG.Botznik2013.chr1.g57586

Location

chr1:3881464..3882822

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr1.g57586.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Tubulin PANTHER Tubulin
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin PRINTS Tubulin
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin_CS ProSitePatterns Tubulin, conserved site
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Alpha_tubulin PRINTS Alpha tubulin

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
GTPase activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
cytoskeleton organization Hs biological process
microtubule-based process Hs biological process
microtubule cytoskeleton Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 552 0.0
GTPase activity Hs molecular function 552 0.0
structural molecule activity Hs molecular function 550 0.0
structural constituent of cytoskeleton Hs molecular function 552 0.0
protein binding Hs molecular function 552 0.0
GTP binding Hs molecular function 552 0.0
nucleus Hs cellular component 552 0.0
cytoplasm Hs cellular component 552 0.0
cytosol Hs cellular component 550 0.0
cytoskeleton Hs cellular component 552 0.0
microtubule Hs cellular component 552 0.0
cytoplasmic microtubule Hs cellular component 550 0.0
microtubule cytoskeleton Hs cellular component 552 0.0
protein domain specific binding Hs molecular function 550 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 550 0.0
myelin sheath Hs cellular component 550 0.0
membrane raft Hs cellular component 550 0.0
recycling endosome Hs cellular component 550 0.0
extracellular exosome Hs cellular component 550 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 7.9E-84
structural constituent of cytoskeleton PRINTS molecular function 5.1E-58
GTP binding PRINTS molecular function 5.1E-58
microtubule PANTHER cellular component 3.7E-196
microtubule-based process PANTHER biological process 3.7E-196