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GENE CARD

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Gene Card

Best human hits

FCN3; FIBCD1; TNXB

Species

B.leachii

Unique Gene ID

Boleac.g00015072

Gene Model ID

Boleac.CG.SB_v3.S896.g15072

Location

S896:29385..33021

Transcript Models and Sequences

  Boleac.CG.SB_v3.S896.g15072.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Fibrinogen_a/b/g_C_1 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal
Fibrinogen_CS ProSitePatterns Fibrinogen, conserved site
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom SMART Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom CDD Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_2 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
complement activation, lectin pathway Hs biological process
immune system process Hs biological process
antigen binding Hs molecular function
serine-type endopeptidase activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
collagen trimer Hs cellular component
proteolysis Hs biological process
complement activation Hs biological process
membrane Hs cellular component
carbohydrate binding Hs molecular function
recognition of apoptotic cell Hs biological process
innate immune response Hs biological process
metal ion binding Hs molecular function
defense response to virus Hs biological process
extracellular exosome Hs cellular component
blood microparticle Hs cellular component
G-protein coupled receptor binding Hs molecular function
plasma membrane Hs cellular component
G-protein coupled receptor signaling pathway Hs biological process
signaling pattern recognition receptor activity Hs molecular function
extrinsic component of external side of plasma membrane Hs cellular component
sialic acid binding Hs molecular function
protein localization to cell surface Hs biological process
secretory granule lumen Hs cellular component
proteoglycan binding Hs molecular function
calcium-dependent protein binding Hs molecular function
defense response to Gram-negative bacterium Hs biological process
defense response to Gram-positive bacterium Hs biological process
ficolin-1-rich granule lumen Hs cellular component
mannan binding Hs molecular function

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
antigen binding Hs molecular function 154 4.51e-44
serine-type endopeptidase activity Hs molecular function 154 4.51e-44
integrin binding Hs molecular function 162 1.13e-43
protein binding Hs molecular function 162 1.13e-43
extracellular region Hs cellular component 162 1.13e-43
proteinaceous extracellular matrix Hs cellular component 162 1.13e-43
collagen trimer Hs cellular component 154 4.51e-44
fibrillar collagen trimer Hs cellular component 162 1.13e-43
extracellular space Hs cellular component 162 1.13e-43
intracellular Hs cellular component 162 1.13e-43
chitin binding Hs molecular function 158 7.09e-44
heparin binding Hs molecular function 162 1.13e-43
membrane Hs cellular component 158 7.09e-44
integral component of membrane Hs cellular component 158 7.09e-44
carbohydrate binding Hs molecular function 154 4.51e-44
extracellular matrix Hs cellular component 162 1.13e-43
metal ion binding Hs molecular function 158 7.09e-44
extracellular exosome Hs cellular component 162 1.13e-43
blood microparticle Hs cellular component 154 4.51e-44

GO (InterProScan)

No result

GO Term Analysis Type e-value