Aniseed - Gene card

Gene 'Boleac.CG.SB_v3.S88....'

Gene Card

Best human hits

BCR; SYDE1; SYDE2

Species

B.leachii

Unique Gene ID

Boleac.g00014952

Gene Model ID

Boleac.CG.SB_v3.S88.g14952

Location

S88:97805..114228

Transcript Models and Sequences

Boleac.CG.SB_v3.S88.g14952.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
C2_dom	Pfam	C2 domain
PDZ	SMART	PDZ domain
PDZ	ProSiteProfiles	PDZ domain
RhoGAP_dom	Pfam	Rho GTPase-activating protein domain
PDZ_sf	SUPERFAMILY	PDZ superfamily
Rho_GTPase_activation_prot	Gene3D	Rho GTPase activation protein
C2_domain_sf	Gene3D	C2 domain superfamily
C2_dom	SMART	C2 domain
PDZ	Pfam	PDZ domain
RhoGAP_dom	ProSiteProfiles	Rho GTPase-activating protein domain
RhoGAP_dom	SMART	Rho GTPase-activating protein domain
Rho_GTPase_activation_prot	SUPERFAMILY	Rho GTPase activation protein

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
GTPase activator activity	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
signal transduction	Hs	biological process
regulation of GTPase activity	Hs	biological process
regulation of small GTPase mediated signal transduction	Hs	biological process
regulation of cytoskeleton organization	Hs	biological process
activation of GTPase activity	Hs	biological process
positive regulation of trophoblast cell migration	Hs	biological process

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	122	9.24e-28
protein serine/threonine kinase activity	Hs	molecular function	122	9.24e-28
protein tyrosine kinase activity	Hs	molecular function	122	9.24e-28
guanyl-nucleotide exchange factor activity	Hs	molecular function	122	9.24e-28
Rho guanyl-nucleotide exchange factor activity	Hs	molecular function	122	9.24e-28
GTPase activator activity	Hs	molecular function	250	1.01e-67
protein binding	Hs	molecular function	122	9.24e-28
ATP binding	Hs	molecular function	122	9.24e-28
intracellular	Hs	cellular component	122	9.24e-28
cytoplasm	Hs	cellular component	250	1.01e-67
cytosol	Hs	cellular component	250	1.01e-67
plasma membrane	Hs	cellular component	122	9.24e-28
postsynaptic density	Hs	cellular component	122	9.24e-28
membrane	Hs	cellular component	122	9.24e-28
kinase activity	Hs	molecular function	122	9.24e-28
transferase activity	Hs	molecular function	122	9.24e-28
enzyme binding	Hs	molecular function	122	9.24e-28
cell junction	Hs	cellular component	122	9.24e-28
macromolecular complex	Hs	cellular component	122	9.24e-28
synapse	Hs	cellular component	122	9.24e-28
postsynaptic membrane	Hs	cellular component	122	9.24e-28
extracellular exosome	Hs	cellular component	122	9.24e-28

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	6.79E-14
signal transduction	Gene3D	biological process	7.9E-49