Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

AC129492.3; VAMP2; VAMP3

Species

B.leachii

Unique Gene ID

Boleac.g00014422

Gene Model ID

Boleac.CG.SB_v3.S81.g14422

Location

S81:66992..76059

Transcript Models and Sequences

  Boleac.CG.SB_v3.S81.g14422.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Synaptobrevin PRINTS Synaptobrevin
Synaptobrevin Pfam Synaptobrevin
Synaptobrevin/VAMP PIRSF Synaptobrevin/Vesicle-associated membrane protein
Synaptobrevin ProSitePatterns Synaptobrevin
Synaptobrevin ProSiteProfiles Synaptobrevin

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
SNARE binding Hs molecular function 139 2.14e-44
SNAP receptor activity Hs molecular function 139 2.14e-44
protein binding Hs molecular function 139 2.14e-44
calmodulin binding Hs molecular function 127 1.55e-39
phospholipid binding Hs molecular function 127 1.55e-39
intracellular Hs cellular component 139 2.14e-44
trans-Golgi network Hs cellular component 127 1.55e-39
cytosol Hs cellular component 139 2.14e-44
plasma membrane Hs cellular component 139 2.14e-44
integral component of plasma membrane Hs cellular component 127 1.55e-39
synaptic vesicle Hs cellular component 127 1.55e-39
voltage-gated potassium channel complex Hs cellular component 127 1.55e-39
cell surface Hs cellular component 139 2.14e-44
membrane Hs cellular component 139 2.14e-44
integral component of membrane Hs cellular component 139 2.14e-44
apical plasma membrane Hs cellular component 139 2.14e-44
syntaxin-1 binding Hs molecular function 139 2.14e-44
syntaxin binding Hs molecular function 127 1.55e-39
cell junction Hs cellular component 139 2.14e-44
transport vesicle Hs cellular component 139 2.14e-44
clathrin-coated vesicle Hs cellular component 139 2.14e-44
secretory granule Hs cellular component 139 2.14e-44
clathrin-coated vesicle membrane Hs cellular component 139 2.14e-44
secretory granule membrane Hs cellular component 127 1.55e-39
phagocytic vesicle membrane Hs cellular component 139 2.14e-44
synaptic vesicle membrane Hs cellular component 127 1.55e-39
SNARE complex Hs cellular component 139 2.14e-44
cytoplasmic vesicle Hs cellular component 139 2.14e-44
vesicle Hs cellular component 127 1.55e-39
trans-Golgi network membrane Hs cellular component 139 2.14e-44
zymogen granule membrane Hs cellular component 127 1.55e-39
neuron projection Hs cellular component 139 2.14e-44
intracellular organelle Hs cellular component 139 2.14e-44
intracellular membrane-bounded organelle Hs cellular component 139 2.14e-44
protein self-association Hs molecular function 127 1.55e-39
neuron projection terminus Hs cellular component 127 1.55e-39
synapse Hs cellular component 139 2.14e-44
phagocytic vesicle Hs cellular component 139 2.14e-44
calcium-dependent protein binding Hs molecular function 127 1.55e-39
perinuclear region of cytoplasm Hs cellular component 139 2.14e-44
recycling endosome Hs cellular component 139 2.14e-44
recycling endosome membrane Hs cellular component 139 2.14e-44
clathrin-sculpted glutamate transport vesicle membrane Hs cellular component 127 1.55e-39
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane Hs cellular component 127 1.55e-39
synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex Hs cellular component 127 1.55e-39
synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex Hs cellular component 127 1.55e-39
synaptobrevin 2-SNAP-25-syntaxin-1a complex Hs cellular component 127 1.55e-39
extracellular exosome Hs cellular component 127 1.55e-39
clathrin-sculpted monoamine transport vesicle membrane Hs cellular component 127 1.55e-39

GO (InterProScan)

2 results

GO Term Analysis Type e-value
integral component of membrane Pfam cellular component 2.2E-35
vesicle-mediated transport Pfam biological process 2.2E-35