Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boleac.CG.SB_v3.S739...'

Gene Card

Best human hits

FOXD1; FOXD3; FOXD4

Species

B.leachii

Unique Gene ID

Boleac.g00013714

Gene Model ID

Boleac.CG.SB_v3.S739.g13714

Location

S739:10980..12901

Transcript Models and Sequences

  Boleac.CG.SB_v3.S739.g13714.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
TF_fork_head_CS_1 ProSitePatterns Fork head domain conserved site1
Fork_head_dom SMART Fork head domain
Fork_head_dom Pfam Fork head domain
TF_fork_head_CS_2 ProSitePatterns Fork head domain conserved site 2
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
Fork_head_dom PRINTS Fork head domain
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Fork_head_dom ProSiteProfiles Fork head domain
Fork_head_dom CDD Fork head domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
DNA binding, bending Hs molecular function
anatomical structure morphogenesis Hs biological process
cell differentiation Hs biological process
sequence-specific DNA binding Hs molecular function

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 199 2.71e-57
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 199 2.71e-57
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 181 8.92e-51
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 199 2.71e-57
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 181 8.92e-51
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 199 2.71e-57
DNA binding Hs molecular function 199 2.71e-57
transcription factor activity, sequence-specific DNA binding Hs molecular function 199 2.71e-57
protein binding Hs molecular function 199 2.71e-57
nucleus Hs cellular component 199 2.71e-57
nucleoplasm Hs cellular component 199 2.71e-57
DNA binding, bending Hs molecular function 196 1.39e-56
sequence-specific DNA binding Hs molecular function 199 2.71e-57

GO (InterProScan)

3 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 1.3E-58
regulation of transcription, DNA-templated SMART biological process 1.3E-58
sequence-specific DNA binding SMART molecular function 1.3E-58