Aniseed - Gene card

Gene 'Boleac.CG.SB_v3.S672...'

Gene Card

Best human hits

CDA

Species

B.leachii

Unique Gene ID

Boleac.g00013010

Gene Model ID

Boleac.CG.SB_v3.S672.g13010

Location

S672:69876..71466

Transcript Models and Sequences

Boleac.CG.SB_v3.S672.g13010.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
CMP_dCMP_dom	ProSiteProfiles	Cytidine and deoxycytidylate deaminase domain
Cytidine_deaminase-like	SUPERFAMILY	Cytidine deaminase-like
CMP_dCMP_dom	Pfam	Cytidine and deoxycytidylate deaminase domain
Cyt_deam_tetra	TIGRFAM	Cytidine deaminase, homotetrameric
APOBEC/CMP_deaminase_Zn-bd	ProSitePatterns	APOBEC/CMP deaminase, zinc-binding

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleoside binding	Hs	molecular function
catalytic activity	Hs	molecular function
cytidine deaminase activity	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
cytosol	Hs	cellular component
cell surface receptor signaling pathway	Hs	biological process
zinc ion binding	Hs	molecular function
cytidine deamination	Hs	biological process
hydrolase activity	Hs	molecular function
negative regulation of cell growth	Hs	biological process
secretory granule lumen	Hs	cellular component
identical protein binding	Hs	molecular function
protein homodimerization activity	Hs	molecular function
pyrimidine nucleoside salvage	Hs	biological process
metal ion binding	Hs	molecular function
protein homotetramerization	Hs	biological process
tertiary granule lumen	Hs	cellular component
ficolin-1-rich granule lumen	Hs	cellular component

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleoside binding	Hs	molecular function	144	3.75e-45
catalytic activity	Hs	molecular function	144	3.75e-45
cytidine deaminase activity	Hs	molecular function	144	3.75e-45
protein binding	Hs	molecular function	144	3.75e-45
extracellular region	Hs	cellular component	144	3.75e-45
cytosol	Hs	cellular component	144	3.75e-45
zinc ion binding	Hs	molecular function	144	3.75e-45
hydrolase activity	Hs	molecular function	144	3.75e-45
secretory granule lumen	Hs	cellular component	144	3.75e-45
identical protein binding	Hs	molecular function	144	3.75e-45
protein homodimerization activity	Hs	molecular function	144	3.75e-45
metal ion binding	Hs	molecular function	144	3.75e-45
tertiary granule lumen	Hs	cellular component	144	3.75e-45
ficolin-1-rich granule lumen	Hs	cellular component	144	3.75e-45

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
catalytic activity	SUPERFAMILY	molecular function	1.37E-42
cytidine deaminase activity	TIGRFAM	molecular function	1.0E-43
zinc ion binding	TIGRFAM	molecular function	1.0E-43
cytidine deamination	TIGRFAM	biological process	1.0E-43
hydrolase activity	ProSitePatterns	molecular function