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GENE CARD

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Gene Card

Best human hits

NOTCH1; NOTCH2; NOTCH3

Species

B.leachii

Unique Gene ID

Boleac.g00012005

Gene Model ID

Boleac.CG.SB_v3.S59.g12005

Location

S59:202189..235589

Transcript Models and Sequences

  Boleac.CG.SB_v3.S59.g12005.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

27 results

IPR Term Analysis Definition
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
EGF-like_CS ProSitePatterns EGF-like, conserved site
Ankyrin_rpt ProSiteProfiles Ankyrin repeat
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site
EGF-like_dom ProSiteProfiles EGF-like domain
Notch_dom ProSiteProfiles Notch domain
Ankyrin_rpt-contain_dom Pfam Ankyrin repeat-containing domain
Ankyrin_rpt SMART Ankyrin repeat
Ankyrin_rpt Pfam Ankyrin repeat
Ankyrin_rpt-contain_dom CDD Ankyrin repeat-containing domain
Notch_dom PRINTS Notch domain
Ankyrin_rpt-contain_dom ProSiteProfiles Ankyrin repeat-containing domain
EGF-like_dom Pfam EGF-like domain
DUF3454_notch Pfam Domain of unknown function DUF3454, notch
Notch-like_dom_sf SUPERFAMILY Notch-like domain superfamily
EGF-like_CS Pfam EGF-like, conserved site
Ankyrin_rpt-contain_sf SUPERFAMILY Ankyrin repeat-containing domain superfamily
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily
EGF-like_dom SMART EGF-like domain
Notch_NODP_dom Pfam Notch, NODP domain
Notch PIRSF Notch
Notch_dom SMART Notch domain
DUF3454_notch SMART Domain of unknown function DUF3454, notch
Notch_NODP_dom SMART Notch, NODP domain
Ankyrin_rpt-contain_sf Gene3D Ankyrin repeat-containing domain superfamily
Notch_dom Pfam Notch domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

154 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
Golgi membrane Hs cellular component
core promoter binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription factor binding Hs molecular function
angiogenesis Hs biological process
acrosomal vesicle Hs cellular component
cell fate specification Hs biological process
cell fate determination Hs biological process
epithelial to mesenchymal transition Hs biological process
liver development Hs biological process
heart looping Hs biological process
sprouting angiogenesis Hs biological process
positive regulation of neuroblast proliferation Hs biological process
MAML1-RBP-Jkappa- ICN1 complex Hs cellular component
endocardium development Hs biological process
endocardium morphogenesis Hs biological process
atrioventricular valve morphogenesis Hs biological process
endocardial cushion development Hs biological process
endocardial cushion morphogenesis Hs biological process
cardiac ventricle morphogenesis Hs biological process
cardiac atrium morphogenesis Hs biological process
ventricular trabecula myocardium morphogenesis Hs biological process
pericardium morphogenesis Hs biological process
chromatin binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
enzyme inhibitor activity Hs molecular function
receptor activity Hs molecular function
transmembrane signaling receptor activity Hs molecular function
Notch binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
adherens junction Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
apoptotic process Hs biological process
immune response Hs biological process
humoral immune response Hs biological process
cell cycle arrest Hs biological process
Notch signaling pathway Hs biological process
positive regulation of transcription of Notch receptor target Hs biological process
multicellular organism development Hs biological process
spermatogenesis Hs biological process
determination of left/right symmetry Hs biological process
compartment pattern specification Hs biological process
nervous system development Hs biological process
axonogenesis Hs biological process
brain development Hs biological process
foregut morphogenesis Hs biological process
endoderm development Hs biological process
heart development Hs biological process
positive regulation of cell proliferation Hs biological process
negative regulation of cell proliferation Hs biological process
epidermis development Hs biological process
regulation of Notch signaling pathway Hs biological process
animal organ morphogenesis Hs biological process
cell surface Hs cellular component
glial cell differentiation Hs biological process
regulation of gene expression Hs biological process
negative regulation of gene expression Hs biological process
positive regulation of epithelial to mesenchymal transition Hs biological process
regulation of somitogenesis Hs biological process
actin cytoskeleton Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
apical plasma membrane Hs cellular component
stem cell population maintenance Hs biological process
enzyme binding Hs molecular function
neural tube development Hs biological process
hemopoiesis Hs biological process
cell differentiation Hs biological process
neuron differentiation Hs biological process
keratinocyte differentiation Hs biological process
negative regulation of ossification Hs biological process
lung development Hs biological process
embryonic limb morphogenesis Hs biological process
regulation of cell migration Hs biological process
positive regulation of cell migration Hs biological process
positive regulation of BMP signaling pathway Hs biological process
negative regulation of BMP signaling pathway Hs biological process
intracellular receptor signaling pathway Hs biological process
forebrain development Hs biological process
animal organ regeneration Hs biological process
cytoplasmic vesicle Hs cellular component
chromatin DNA binding Hs molecular function
response to lipopolysaccharide Hs biological process
embryonic hindlimb morphogenesis Hs biological process
tube formation Hs biological process
skeletal muscle cell differentiation Hs biological process
cellular response to vascular endothelial growth factor stimulus Hs biological process
transcription factor activity, ligand-activated RNA polymerase II transcription factor binding Hs molecular function
regulation of cell proliferation Hs biological process
tissue regeneration Hs biological process
identical protein binding Hs molecular function
positive regulation of apoptotic process Hs biological process
negative regulation of apoptotic process Hs biological process
negative regulation of catalytic activity Hs biological process
receptor complex Hs cellular component
sequence-specific DNA binding Hs molecular function
cell fate commitment Hs biological process
cadherin binding Hs molecular function
negative regulation of cell differentiation Hs biological process
positive regulation of endothelial cell differentiation Hs biological process
negative regulation of neuron differentiation Hs biological process
negative regulation of osteoblast differentiation Hs biological process
negative regulation of Notch signaling pathway Hs biological process
positive regulation of Notch signaling pathway Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
negative regulation of growth rate Hs biological process
positive regulation of JAK-STAT cascade Hs biological process
negative regulation of photoreceptor cell differentiation Hs biological process
positive regulation of Ras protein signal transduction Hs biological process
bone remodeling Hs biological process
metal ion binding Hs molecular function
protein heterodimerization activity Hs molecular function
somatic stem cell division Hs biological process
neuron fate commitment Hs biological process
astrocyte differentiation Hs biological process
oligodendrocyte differentiation Hs biological process
branching morphogenesis of an epithelial tube Hs biological process
artery morphogenesis Hs biological process
venous blood vessel morphogenesis Hs biological process
regulation of epithelial cell proliferation Hs biological process
positive regulation of epithelial cell proliferation Hs biological process
regulation of neurogenesis Hs biological process
negative regulation of neurogenesis Hs biological process
regulation of developmental process Hs biological process
cardiac muscle tissue morphogenesis Hs biological process
cardiac muscle cell proliferation Hs biological process
negative regulation of glial cell proliferation Hs biological process
cilium assembly Hs biological process
negative regulation of cell death Hs biological process
arterial endothelial cell differentiation Hs biological process
endocardial cell differentiation Hs biological process
positive regulation of ERK1 and ERK2 cascade Hs biological process
left/right axis specification Hs biological process
cell periphery Hs cellular component
glomerular capillary formation Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
neuronal stem cell population maintenance Hs biological process
negative regulation of stem cell differentiation Hs biological process

GO (Blast)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 1452 0.0
core promoter binding Hs molecular function 1433 0.0
transcriptional activator activity, RNA polymerase II transcription factor binding Hs molecular function 1433 0.0
acrosomal vesicle Hs cellular component 1433 0.0
MAML1-RBP-Jkappa- ICN1 complex Hs cellular component 1433 0.0
chromatin binding Hs molecular function 1433 0.0
transcription factor activity, sequence-specific DNA binding Hs molecular function 1433 0.0
enzyme inhibitor activity Hs molecular function 1433 0.0
receptor activity Hs molecular function 1452 0.0
transmembrane signaling receptor activity Hs molecular function 1433 0.0
Notch binding Hs molecular function 1433 0.0
calcium ion binding Hs molecular function 1452 0.0
protein binding Hs molecular function 1452 0.0
extracellular region Hs cellular component 1452 0.0
nucleus Hs cellular component 1452 0.0
nucleoplasm Hs cellular component 1452 0.0
cytoplasm Hs cellular component 1452 0.0
endoplasmic reticulum Hs cellular component 1433 0.0
endoplasmic reticulum membrane Hs cellular component 1452 0.0
Golgi apparatus Hs cellular component 1433 0.0
cytosol Hs cellular component 1433 0.0
plasma membrane Hs cellular component 1452 0.0
integral component of plasma membrane Hs cellular component 1452 0.0
adherens junction Hs cellular component 1433 0.0
cell surface Hs cellular component 1452 0.0
actin cytoskeleton Hs cellular component 1159 0.0
membrane Hs cellular component 1452 0.0
integral component of membrane Hs cellular component 1452 0.0
apical plasma membrane Hs cellular component 1433 0.0
enzyme binding Hs molecular function 1433 0.0
cytoplasmic vesicle Hs cellular component 1433 0.0
chromatin DNA binding Hs molecular function 1433 0.0
transcription factor activity, ligand-activated RNA polymerase II transcription factor binding Hs molecular function 1452 0.0
identical protein binding Hs molecular function 1159 0.0
receptor complex Hs cellular component 1452 0.0
sequence-specific DNA binding Hs molecular function 1433 0.0
cadherin binding Hs molecular function 1159 0.0
metal ion binding Hs molecular function 1433 0.0
protein heterodimerization activity Hs molecular function 1433 0.0
cell periphery Hs cellular component 1433 0.0

GO (InterProScan)

7 results

GO Term Analysis Type e-value
calcium ion binding SMART molecular function 1.7E-12
protein binding SMART molecular function 1.9E-4
Notch signaling pathway PIRSF biological process 0.0
multicellular organism development Pfam biological process 1.5E-5
integral component of membrane PIRSF cellular component 0.0
cell differentiation PIRSF biological process 0.0
regulation of developmental process PIRSF biological process 0.0

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