Aniseed - Gene card

Gene Card

Best human hits

ITGB1; ITGB2; ITGB7

Species

B.leachii

Unique Gene ID

Boleac.g00011055

Gene Model ID

Boleac.CG.SB_v3.S518.g11055

Location

S518:32856..42629

Transcript Models and Sequences

Boleac.CG.SB_v3.S518.g11055.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Integrin_bsu_VWA	SMART	Integrin beta subunit, VWA domain
Integrin_bsu_VWA	Pfam	Integrin beta subunit, VWA domain
Integrin_bsu	ProSitePatterns	Integrin beta subunit
Integrin_bsu	PANTHER	Integrin beta subunit
vWFA_dom_sf	Gene3D	von Willebrand factor A-like domain superfamily
Integrin_bsu	PRINTS	Integrin beta subunit
Integrin_dom_sf	SUPERFAMILY	Integrin domain superfamily
vWFA_dom_sf	SUPERFAMILY	von Willebrand factor A-like domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

128 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G1/S transition of mitotic cell cycle	Hs	biological process
amyloid-beta binding	Hs	molecular function
virus receptor activity	Hs	molecular function
cell fate specification	Hs	biological process
ruffle	Hs	cellular component
complement component C3b binding	Hs	molecular function
fibronectin binding	Hs	molecular function
protease binding	Hs	molecular function
cell migration involved in sprouting angiogenesis	Hs	biological process
leukocyte migration involved in inflammatory response	Hs	biological process
actin binding	Hs	molecular function
receptor activity	Hs	molecular function
integrin binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
phagocytosis	Hs	biological process
phagocytosis, engulfment	Hs	biological process
apoptotic process	Hs	biological process
inflammatory response	Hs	biological process
cellular defense response	Hs	biological process
cell adhesion	Hs	biological process
homophilic cell adhesion via plasma membrane adhesion molecules	Hs	biological process
cell-matrix adhesion	Hs	biological process
integrin-mediated signaling pathway	Hs	biological process
cell-cell signaling	Hs	biological process
aging	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
integrin complex	Hs	cellular component
germ cell migration	Hs	biological process
regulation of cell shape	Hs	biological process
visual learning	Hs	biological process
external side of plasma membrane	Hs	cellular component
cell surface	Hs	cellular component
intercalated disc	Hs	cellular component
coreceptor activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
viral process	Hs	biological process
cell migration	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
protein kinase binding	Hs	molecular function
C-X3-C chemokine binding	Hs	molecular function
formation of radial glial scaffolds	Hs	biological process
lamellipodium	Hs	cellular component
cell junction	Hs	cellular component
filopodium	Hs	cellular component
B cell differentiation	Hs	biological process
extracellular matrix organization	Hs	biological process
ICAM-3 receptor activity	Hs	molecular function
neutrophil chemotaxis	Hs	biological process
heat shock protein binding	Hs	molecular function
neuron projection development	Hs	biological process
cytoplasmic vesicle	Hs	cellular component
cell-substrate adhesion	Hs	biological process
neuromuscular junction	Hs	cellular component
receptor internalization	Hs	biological process
cleavage furrow	Hs	cellular component
ruffle membrane	Hs	cellular component
cell adhesion mediated by integrin	Hs	biological process
cell-cell adhesion mediated by integrin	Hs	biological process
toll-like receptor 4 signaling pathway	Hs	biological process
substrate adhesion-dependent cell spreading	Hs	biological process
integrin alpha1-beta1 complex	Hs	cellular component
integrin alpha2-beta1 complex	Hs	cellular component
integrin alpha3-beta1 complex	Hs	cellular component
integrin alpha4-beta7 complex	Hs	cellular component
integrin alpha7-beta1 complex	Hs	cellular component
integrin alpha8-beta1 complex	Hs	cellular component
integrin alpha10-beta1 complex	Hs	cellular component
integrin alpha11-beta1 complex	Hs	cellular component
integrin alphaL-beta2 complex	Hs	cellular component
integrin alphaM-beta2 complex	Hs	cellular component
negative regulation of Rho protein signal transduction	Hs	biological process
specific granule membrane	Hs	cellular component
myelin sheath abaxonal region	Hs	cellular component
endodermal cell differentiation	Hs	biological process
sarcolemma	Hs	cellular component
melanosome	Hs	cellular component
cell projection	Hs	cellular component
positive regulation of apoptotic process	Hs	biological process
receptor clustering	Hs	biological process
dendritic spine	Hs	cellular component
receptor complex	Hs	cellular component
laminin binding	Hs	molecular function
endothelial cell migration	Hs	biological process
positive regulation of GTPase activity	Hs	biological process
plasma membrane raft	Hs	cellular component
macromolecular complex binding	Hs	molecular function
membrane raft	Hs	cellular component
synapse	Hs	cellular component
sarcomere organization	Hs	biological process
cadherin binding	Hs	molecular function
positive regulation of nitric oxide biosynthetic process	Hs	biological process
negative regulation of cell differentiation	Hs	biological process
positive regulation of angiogenesis	Hs	biological process
viral entry into host cell	Hs	biological process
metal ion binding	Hs	molecular function
protein heterodimerization activity	Hs	molecular function
mesodermal cell differentiation	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
axon extension	Hs	biological process
cardiac muscle tissue development	Hs	biological process
dendrite morphogenesis	Hs	biological process
regulation of peptidyl-tyrosine phosphorylation	Hs	biological process
regulation of immune response	Hs	biological process
cell adhesion molecule binding	Hs	molecular function
leukocyte migration	Hs	biological process
positive regulation of NF-kappaB transcription factor activity	Hs	biological process
regulation of cell cycle	Hs	biological process
positive regulation of protein kinase B signaling	Hs	biological process
cardiac muscle cell differentiation	Hs	biological process
recycling endosome	Hs	cellular component
extracellular exosome	Hs	cellular component
tertiary granule membrane	Hs	cellular component
invadopodium membrane	Hs	cellular component
basement membrane organization	Hs	biological process
synaptic membrane	Hs	cellular component
cell-cell adhesion	Hs	biological process
collagen binding involved in cell-matrix adhesion	Hs	molecular function
cytoplasmic region	Hs	cellular component
ficolin-1-rich granule membrane	Hs	cellular component
positive regulation of protein localization to plasma membrane	Hs	biological process
extracellular vesicle	Hs	cellular component
neutrophil migration	Hs	biological process
positive regulation of receptor activity	Hs	biological process

GO (Blast)

68 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
amyloid-beta binding	Hs	molecular function	366	7.99e-118
virus receptor activity	Hs	molecular function	398	1.16e-129
ruffle	Hs	cellular component	398	1.16e-129
complement component C3b binding	Hs	molecular function	366	7.99e-118
fibronectin binding	Hs	molecular function	398	1.16e-129
protease binding	Hs	molecular function	398	1.16e-129
actin binding	Hs	molecular function	398	1.16e-129
receptor activity	Hs	molecular function	398	1.16e-129
integrin binding	Hs	molecular function	398	1.16e-129
protein binding	Hs	molecular function	398	1.16e-129
cytoplasm	Hs	cellular component	398	1.16e-129
endosome	Hs	cellular component	398	1.16e-129
plasma membrane	Hs	cellular component	398	1.16e-129
focal adhesion	Hs	cellular component	398	1.16e-129
integrin complex	Hs	cellular component	398	1.16e-129
external side of plasma membrane	Hs	cellular component	398	1.16e-129
cell surface	Hs	cellular component	398	1.16e-129
intercalated disc	Hs	cellular component	398	1.16e-129
coreceptor activity	Hs	molecular function	398	1.16e-129
membrane	Hs	cellular component	398	1.16e-129
integral component of membrane	Hs	cellular component	398	1.16e-129
protein kinase binding	Hs	molecular function	366	7.99e-118
C-X3-C chemokine binding	Hs	molecular function	398	1.16e-129
lamellipodium	Hs	cellular component	398	1.16e-129
cell junction	Hs	cellular component	398	1.16e-129
filopodium	Hs	cellular component	398	1.16e-129
ICAM-3 receptor activity	Hs	molecular function	366	7.99e-118
heat shock protein binding	Hs	molecular function	366	7.99e-118
cytoplasmic vesicle	Hs	cellular component	398	1.16e-129
neuromuscular junction	Hs	cellular component	398	1.16e-129
cleavage furrow	Hs	cellular component	398	1.16e-129
ruffle membrane	Hs	cellular component	398	1.16e-129
integrin alpha1-beta1 complex	Hs	cellular component	398	1.16e-129
integrin alpha2-beta1 complex	Hs	cellular component	398	1.16e-129
integrin alpha3-beta1 complex	Hs	cellular component	398	1.16e-129
integrin alpha4-beta7 complex	Hs	cellular component	389	5.16e-126
integrin alpha7-beta1 complex	Hs	cellular component	398	1.16e-129
integrin alpha8-beta1 complex	Hs	cellular component	398	1.16e-129
integrin alpha10-beta1 complex	Hs	cellular component	398	1.16e-129
integrin alpha11-beta1 complex	Hs	cellular component	398	1.16e-129
integrin alphaL-beta2 complex	Hs	cellular component	366	7.99e-118
integrin alphaM-beta2 complex	Hs	cellular component	366	7.99e-118
specific granule membrane	Hs	cellular component	366	7.99e-118
myelin sheath abaxonal region	Hs	cellular component	398	1.16e-129
sarcolemma	Hs	cellular component	398	1.16e-129
melanosome	Hs	cellular component	398	1.16e-129
cell projection	Hs	cellular component	398	1.16e-129
dendritic spine	Hs	cellular component	398	1.16e-129
receptor complex	Hs	cellular component	398	1.16e-129
laminin binding	Hs	molecular function	398	1.16e-129
plasma membrane raft	Hs	cellular component	366	7.99e-118
macromolecular complex binding	Hs	molecular function	398	1.16e-129
membrane raft	Hs	cellular component	398	1.16e-129
synapse	Hs	cellular component	398	1.16e-129
cadherin binding	Hs	molecular function	398	1.16e-129
metal ion binding	Hs	molecular function	398	1.16e-129
protein heterodimerization activity	Hs	molecular function	398	1.16e-129
perinuclear region of cytoplasm	Hs	cellular component	398	1.16e-129
cell adhesion molecule binding	Hs	molecular function	398	1.16e-129
recycling endosome	Hs	cellular component	398	1.16e-129
extracellular exosome	Hs	cellular component	398	1.16e-129
tertiary granule membrane	Hs	cellular component	366	7.99e-118
invadopodium membrane	Hs	cellular component	398	1.16e-129
synaptic membrane	Hs	cellular component	398	1.16e-129
collagen binding involved in cell-matrix adhesion	Hs	molecular function	398	1.16e-129
cytoplasmic region	Hs	cellular component	366	7.99e-118
ficolin-1-rich granule membrane	Hs	cellular component	366	7.99e-118
extracellular vesicle	Hs	cellular component	366	7.99e-118

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value