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GENE CARD

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Gene Card

Best human hits

NUP50

Species

B.leachii

Unique Gene ID

Boleac.g00010164

Gene Model ID

Boleac.CG.SB_v3.S461.g10164

Location

S461:63390..66823

Transcript Models and Sequences

  Boleac.CG.SB_v3.S461.g10164.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Ran_bind_dom ProSiteProfiles Ran binding domain
Ran_bind_dom SMART Ran binding domain
NUP2/50/61 Pfam Nuclear pore complex, NUP2/50/61
PH-like_dom_sf Gene3D PH-like domain superfamily
Ran_bind_dom Pfam Ran binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nuclear pore Hs cellular component
nucleoplasm Hs cellular component
regulation of glycolytic process Hs biological process
mRNA export from nucleus Hs biological process
tRNA export from nucleus Hs biological process
protein import into nucleus Hs biological process
Ran GTPase binding Hs molecular function
protein transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
viral process Hs biological process
protein sumoylation Hs biological process
nuclear membrane Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
host cell Hs cellular component
intracellular transport Hs biological process
mRNA transport Hs biological process
regulation of gene silencing by miRNA Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 236 5.35e-73
nucleus Hs cellular component 236 5.35e-73
nuclear pore Hs cellular component 236 5.35e-73
nucleoplasm Hs cellular component 236 5.35e-73
Ran GTPase binding Hs molecular function 236 5.35e-73
membrane Hs cellular component 236 5.35e-73
integral component of membrane Hs cellular component 236 5.35e-73
nuclear membrane Hs cellular component 236 5.35e-73
intracellular membrane-bounded organelle Hs cellular component 236 5.35e-73
host cell Hs cellular component 236 5.35e-73

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nuclear pore Pfam cellular component 1.4E-19
intracellular transport Pfam biological process 1.2E-9