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GENE CARD

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Gene Card

Best human hits

HMCN1; HMCN2; HSPG2

Species

B.leachii

Unique Gene ID

Boleac.g00010068

Gene Model ID

Boleac.CG.SB_v3.S456.g10068

Location

S456:63665..89315

Transcript Models and Sequences

  Boleac.CG.SB_v3.S456.g10068.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

20 results

IPR Term Analysis Definition
Ig_sub SMART Immunoglobulin subtype
Ig-like_fold Gene3D Immunoglobulin-like fold
Laminin_G Pfam Laminin G domain
Laminin_IV SMART Laminin IV
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Laminin_G SMART Laminin G domain
Laminin_EGF ProSitePatterns Laminin EGF domain
EGF-like_dom SMART EGF-like domain
EGF-like_CS ProSitePatterns EGF-like, conserved site
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
Laminin_EGF ProSiteProfiles Laminin EGF domain
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Laminin_IV ProSiteProfiles Laminin IV
Laminin_G ProSiteProfiles Laminin G domain
Laminin_EGF SMART Laminin EGF domain
EGF-like_dom ProSiteProfiles EGF-like domain
Ig_sub2 SMART Immunoglobulin subtype 2
Laminin_IV Pfam Laminin IV
Laminin_EGF Pfam Laminin EGF domain
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
retinoid metabolic process Hs biological process
angiogenesis Hs biological process
calcium ion binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
basement membrane Hs cellular component
extracellular space Hs cellular component
Golgi lumen Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
glycosaminoglycan biosynthetic process Hs biological process
glycosaminoglycan catabolic process Hs biological process
lipid metabolic process Hs biological process
receptor-mediated endocytosis Hs biological process
inflammatory response Hs biological process
brain development Hs biological process
protein C-terminus binding Hs molecular function
cell growth Hs biological process
negative regulation of angiogenesis Hs biological process
cell differentiation Hs biological process
extracellular matrix organization Hs biological process
glycosaminoglycan metabolic process Hs biological process
extracellular matrix Hs cellular component
lysosomal lumen Hs cellular component
metal ion binding Hs molecular function
low-density lipoprotein particle receptor binding Hs molecular function
extracellular exosome Hs cellular component
cardiovascular system development Hs biological process
plasma membrane protein complex Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 829 0.0
protein binding Hs molecular function 829 0.0
extracellular region Hs cellular component 829 0.0
proteinaceous extracellular matrix Hs cellular component 829 0.0
basement membrane Hs cellular component 829 0.0
extracellular space Hs cellular component 829 0.0
cytoplasm Hs cellular component 251 2.20e-66
Golgi lumen Hs cellular component 829 0.0
plasma membrane Hs cellular component 829 0.0
focal adhesion Hs cellular component 829 0.0
cell cortex Hs cellular component 251 2.20e-66
protein C-terminus binding Hs molecular function 829 0.0
membrane Hs cellular component 230 6.85e-60
cell junction Hs cellular component 251 2.20e-66
extracellular matrix Hs cellular component 829 0.0
cleavage furrow Hs cellular component 251 2.20e-66
lysosomal lumen Hs cellular component 829 0.0
metal ion binding Hs molecular function 829 0.0
low-density lipoprotein particle receptor binding Hs molecular function 829 0.0
extracellular exosome Hs cellular component 829 0.0
plasma membrane protein complex Hs cellular component 829 0.0

GO (InterProScan)

No result

GO Term Analysis Type e-value