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GENE CARD

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  1. Gene 'Harore.CG.MTP2014.S6...'

Gene Card

Best human hits

BCL2L2-PABPN1; PABPN1; PABPN1L

Species

B.leachii

Unique Gene ID

Boleac.g00009605

Gene Model ID

Boleac.CG.SB_v3.S428.g09605

Location

S428:56569..57145

Transcript Models and Sequences

  Boleac.CG.SB_v3.S428.g09605.01.t

External Database Gene Card

External database links

No result

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom Pfam RNA recognition motif domain
PABP2 PANTHER Polyadenylate-binding protein 2
RRM_dom SMART RNA recognition motif domain
RRM_dom ProSiteProfiles RNA recognition motif domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 171 1.00e-52
RNA binding Hs molecular function 171 1.00e-52
protein binding Hs molecular function 171 1.00e-52
nucleus Hs cellular component 169 2.82e-52
nucleoplasm Hs cellular component 169 2.82e-52
cytoplasm Hs cellular component 169 2.82e-52
mitochondrion Hs cellular component 171 1.00e-52
mitochondrial outer membrane Hs cellular component 171 1.00e-52
membrane Hs cellular component 171 1.00e-52
nuclear speck Hs cellular component 169 2.82e-52
intracellular ribonucleoprotein complex Hs cellular component 169 2.82e-52
mitochondrial membrane Hs cellular component 171 1.00e-52
nuclear inclusion body Hs cellular component 169 2.82e-52
identical protein binding Hs molecular function 171 1.00e-52
protein homodimerization activity Hs molecular function 171 1.00e-52
protein heterodimerization activity Hs molecular function 171 1.00e-52
extracellular exosome Hs cellular component 171 1.00e-52
RNA polymerase binding Hs molecular function 169 2.82e-52
Bcl-2 family protein complex Hs cellular component 171 1.00e-52
disordered domain specific binding Hs molecular function 171 1.00e-52

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.6E-30
RNA binding PANTHER molecular function 4.2E-71
positive regulation of polynucleotide adenylyltransferase activity PANTHER biological process 4.2E-71