Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boleac.CG.SB_v3.S359...'

Gene Card

Best human hits

SNX13; SNX14; SNX25

Species

B.leachii

Unique Gene ID

Boleac.g00008293

Gene Model ID

Boleac.CG.SB_v3.S359.g08293

Location

S359:91688..116519

Transcript Models and Sequences

  Boleac.CG.SB_v3.S359.g08293.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
PX_dom_sf SUPERFAMILY PX domain superfamily
Sorting_nexin_C Pfam Sorting nexin, C-terminal
RGS SMART RGS domain
Phox SMART Phox homologous domain
SNX13_RGS CDD SNX13, RGS domain
RGS_sf SUPERFAMILY RGS domain superfamily
PX_dom_sf Gene3D PX domain superfamily
Phox_assoc SMART Phox-associated domain
Phox ProSiteProfiles Phox homologous domain
RGS Pfam RGS domain
RGS ProSiteProfiles RGS domain
Phox_assoc Pfam Phox-associated domain
Phox Pfam Phox homologous domain
Phox_assoc ProSiteProfiles Phox-associated domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
endosome Hs cellular component
early endosome Hs cellular component
intracellular protein transport Hs biological process
lipid binding Hs molecular function
negative regulation of signal transduction Hs biological process
protein transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
early endosome membrane Hs cellular component
phosphatidylinositol-3-phosphate binding Hs molecular function
phosphatidylinositol binding Hs molecular function
positive regulation of GTPase activity Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
lysosome Hs cellular component 79.3 7.17e-15
lysosomal membrane Hs cellular component 79.3 7.17e-15
endosome Hs cellular component 684 0.0
early endosome Hs cellular component 684 0.0
late endosome Hs cellular component 79.3 7.17e-15
lipid binding Hs molecular function 684 0.0
endosome membrane Hs cellular component 118 5.51e-27
membrane Hs cellular component 684 0.0
integral component of membrane Hs cellular component 684 0.0
dendrite Hs cellular component 79.3 7.17e-15
early endosome membrane Hs cellular component 684 0.0
late endosome membrane Hs cellular component 79.3 7.17e-15
phosphatidylinositol-3-phosphate binding Hs molecular function 684 0.0
type I transforming growth factor beta receptor binding Hs molecular function 118 5.51e-27
phosphatidylinositol binding Hs molecular function 684 0.0
cell projection Hs cellular component 79.3 7.17e-15
intracellular membrane-bounded organelle Hs cellular component 118 5.51e-27
phosphatidylinositol-3,5-bisphosphate binding Hs molecular function 79.3 7.17e-15

GO (InterProScan)

2 results

GO Term Analysis Type e-value
phosphatidylinositol binding Gene3D molecular function 2.3E-20
positive regulation of GTPase activity CDD biological process 1.10141E-61