Aniseed - Gene card

Gene Card

Best human hits

IRX2; IRX4; IRX6

Species

B.leachii

Unique Gene ID

Boleac.g00004638

Gene Model ID

Boleac.CG.SB_v3.S20.g04638

Location

S20:297146..306689

Transcript Models and Sequences

Boleac.CG.SB_v3.S20.g04638.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Homeobox_KN_domain	Pfam	Homeobox KN domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox_dom	SMART	Homeobox domain
Homeobox_dom	CDD	Homeobox domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
regulation of heart rate	Hs	biological process
vitamin D binding	Hs	molecular function
transcription, DNA-templated	Hs	biological process
visual perception	Hs	biological process
gonad development	Hs	biological process
regulation of gene expression	Hs	biological process
cell development	Hs	biological process
embryonic cranial skeleton morphogenesis	Hs	biological process
response to stimulus	Hs	biological process

GO (Blast)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	159	3.22e-42
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	148	3.30e-38
DNA binding	Hs	molecular function	159	3.22e-42
nucleus	Hs	cellular component	159	3.22e-42
sequence-specific DNA binding	Hs	molecular function	159	3.22e-42

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SUPERFAMILY	molecular function	2.35E-17
regulation of transcription, DNA-templated	Pfam	biological process	1.3E-14
sequence-specific DNA binding	ProSitePatterns	molecular function