Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phfumi.CG.MTP2014.S2...'
  2. Gene 'Boleac.CG.SB_v3.S198...'

Gene Card

Best human hits

AC079594.2; TRIM54; TRIM55

Species

B.leachii

Unique Gene ID

Boleac.g00004487

Gene Model ID

Boleac.CG.SB_v3.S198.g04487

Location

S198:111892..116825

Transcript Models and Sequences

  Boleac.CG.SB_v3.S198.g04487.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_B-box Pfam B-box-type zinc finger
Znf_B-box SMART B-box-type zinc finger
Znf-RING_LisH Pfam RING-type zinc-finger, LisH dimerisation motif
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_B-box CDD B-box-type zinc finger
Znf_RING SMART Zinc finger, RING-type
Znf_B-box ProSiteProfiles B-box-type zinc finger

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
signal transducer activity Hs molecular function 85.5 1.40e-18
protein binding Hs molecular function 85.5 1.40e-18
intracellular Hs cellular component 85.5 1.40e-18
nucleus Hs cellular component 85.5 1.40e-18
cytoplasm Hs cellular component 85.5 1.40e-18
centrosome Hs cellular component 85.5 2.27e-18
cytoskeleton Hs cellular component 82.8 7.38e-18
microtubule Hs cellular component 85.5 1.40e-18
microtubule associated complex Hs cellular component 82.8 7.38e-18
cilium Hs cellular component 85.5 2.27e-18
microtubule binding Hs molecular function 82.8 7.38e-18
zinc ion binding Hs molecular function 85.5 1.40e-18
Z disc Hs cellular component 82.8 7.38e-18
intraciliary transport particle B Hs cellular component 85.5 2.27e-18
identical protein binding Hs molecular function 85.5 1.40e-18
metal ion binding Hs molecular function 85.5 1.40e-18

GO (InterProScan)

2 results

GO Term Analysis Type e-value
intracellular Pfam cellular component 1.8E-7
zinc ion binding Pfam molecular function 1.8E-7