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GENE CARD

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Gene Card

Best human hits

LARP6; LARP7

Species

B.leachii

Unique Gene ID

Boleac.g00003476

Gene Model ID

Boleac.CG.SB_v3.S164.g03476

Location

S164:49643..51997

Transcript Models and Sequences

  Boleac.CG.SB_v3.S164.g03476.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
RRM_dom ProSiteProfiles RNA recognition motif domain
La_HTH Pfam La-type HTH domain
La_HTH ProSiteProfiles La-type HTH domain
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
La_HTH SMART La-type HTH domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 68.2 2.43e-12
RNA binding Hs molecular function 68.2 2.43e-12
protein binding Hs molecular function 68.2 2.43e-12
nucleus Hs cellular component 68.2 2.43e-12
nucleoplasm Hs cellular component 38.9 0.005
cytoplasm Hs cellular component 68.2 2.43e-12
cytosol Hs cellular component 38.9 0.005
polysome Hs cellular component 68.2 2.43e-12
myosin binding Hs molecular function 68.2 2.43e-12
intracellular ribonucleoprotein complex Hs cellular component 68.2 2.43e-12
RNA stem-loop binding Hs molecular function 68.2 2.43e-12
mRNA 5'-UTR binding Hs molecular function 68.2 2.43e-12
sequence-specific mRNA binding Hs molecular function 68.2 2.43e-12

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 3.1E-6