Aniseed - Gene card

Gene Card

Best human hits

SMO; SUV39H1; SUV39H2

Species

B.leachii

Unique Gene ID

Boleac.g00003327

Gene Model ID

Boleac.CG.SB_v3.S16.g03327

Location

S16:79872..97734

Transcript Models and Sequences

Boleac.CG.SB_v3.S16.g03327.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

24 results

IPR Term	Analysis	Definition
Frizzled_dom	ProSiteProfiles	Frizzled domain
Frizzled/Smoothened_TM	SMART	Frizzled/Smoothened, transmembrane domain
Pre-SET_dom	ProSiteProfiles	Pre-SET domain
Frizzled/Smoothened_TM	Pfam	Frizzled/Smoothened, transmembrane domain
SMO_7TM	CDD	Smoothened, transmembrane domain
Chromo-like_dom_sf	SUPERFAMILY	Chromo-like domain superfamily
Pre-SET_dom	Pfam	Pre-SET domain
Frizzled_dom	Pfam	Frizzled domain
Chromo_domain	Pfam	Chromo domain
SMO	PANTHER	Smoothened
Frizzled_dom_sf	Gene3D	Frizzled cysteine-rich domain superfamily
Chromodomain_CS	ProSitePatterns	Chromo domain, conserved site
Chromo/chromo_shadow_dom	CDD	Chromo/chromo shadow domain
SET_dom	ProSiteProfiles	SET domain
Chromo/chromo_shadow_dom	ProSiteProfiles	Chromo/chromo shadow domain
Pre-SET_dom	SMART	Pre-SET domain
SET_dom	Pfam	SET domain
SET_dom	SMART	SET domain
Frizzled/SFRP	PANTHER	Frizzled/secreted frizzled-related protein
GPCR_2-like	ProSiteProfiles	GPCR, family 2-like
Frizzled/Smoothened_TM	PRINTS	Frizzled/Smoothened, transmembrane domain
Chromo/chromo_shadow_dom	SMART	Chromo/chromo shadow domain
Frizzled_dom_sf	SUPERFAMILY	Frizzled cysteine-rich domain superfamily
Frizzled_dom	SMART	Frizzled domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

79 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
ossification	Hs	biological process
vasculogenesis	Hs	biological process
osteoblast differentiation	Hs	biological process
cell fate specification	Hs	biological process
neural crest cell migration	Hs	biological process
heart looping	Hs	biological process
positive regulation of neuroblast proliferation	Hs	biological process
heart morphogenesis	Hs	biological process
determination of left/right asymmetry in lateral mesoderm	Hs	biological process
type B pancreatic cell development	Hs	biological process
signal transducer activity	Hs	molecular function
transmembrane signaling receptor activity	Hs	molecular function
G-protein coupled receptor activity	Hs	molecular function
patched binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
plasma membrane	Hs	cellular component
caveola	Hs	cellular component
cilium	Hs	cellular component
signal transduction	Hs	biological process
cell surface receptor signaling pathway	Hs	biological process
G-protein coupled receptor signaling pathway	Hs	biological process
smoothened signaling pathway	Hs	biological process
positive regulation of hh target transcription factor activity	Hs	biological process
multicellular organism development	Hs	biological process
determination of left/right symmetry	Hs	biological process
pattern specification process	Hs	biological process
central nervous system development	Hs	biological process
midgut development	Hs	biological process
drug binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
anterior/posterior pattern specification	Hs	biological process
dorsal/ventral pattern formation	Hs	biological process
regulation of gene expression	Hs	biological process
positive regulation of gene expression	Hs	biological process
negative regulation of gene expression	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
Wnt-protein binding	Hs	molecular function
thalamus development	Hs	biological process
smoothened signaling pathway involved in ventral spinal cord patterning	Hs	biological process
central nervous system neuron differentiation	Hs	biological process
cerebral cortex development	Hs	biological process
endocytic vesicle membrane	Hs	cellular component
protein localization to nucleus	Hs	biological process
multicellular organism growth	Hs	biological process
positive regulation of multicellular organism growth	Hs	biological process
positive regulation of protein import into nucleus	Hs	biological process
cell projection	Hs	cellular component
negative regulation of apoptotic process	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
negative regulation of DNA binding	Hs	biological process
positive regulation of smoothened signaling pathway	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
positive regulation of organ growth	Hs	biological process
astrocyte activation	Hs	biological process
cell development	Hs	biological process
digestive tract development	Hs	biological process
embryonic organ development	Hs	biological process
developmental growth	Hs	biological process
skeletal muscle fiber development	Hs	biological process
forebrain morphogenesis	Hs	biological process
homeostasis of number of cells within a tissue	Hs	biological process
positive regulation of epithelial cell proliferation	Hs	biological process
protein stabilization	Hs	biological process
myoblast migration	Hs	biological process
ciliary membrane	Hs	cellular component
somite development	Hs	biological process
pancreas morphogenesis	Hs	biological process
extracellular exosome	Hs	cellular component
left/right axis specification	Hs	biological process
renal system development	Hs	biological process
positive regulation of branching involved in ureteric bud morphogenesis	Hs	biological process
ciliary tip	Hs	cellular component
regulation of heart morphogenesis	Hs	biological process

GO (Blast)

42 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromosome, centromeric region	Hs	cellular component	333	7.83e-103
chromatin	Hs	cellular component	333	7.83e-103
heterochromatin	Hs	cellular component	312	4.53e-95
condensed nuclear chromosome	Hs	cellular component	312	4.53e-95
transcription regulatory region sequence-specific DNA binding	Hs	molecular function	333	7.83e-103
chromatin binding	Hs	molecular function	312	4.53e-95
signal transducer activity	Hs	molecular function	660	0.0
transmembrane signaling receptor activity	Hs	molecular function	660	0.0
G-protein coupled receptor activity	Hs	molecular function	660	0.0
patched binding	Hs	molecular function	660	0.0
protein binding	Hs	molecular function	660	0.0
nucleus	Hs	cellular component	333	7.83e-103
nuclear lamina	Hs	cellular component	312	4.53e-95
nucleoplasm	Hs	cellular component	333	7.83e-103
chromatin silencing complex	Hs	cellular component	312	4.53e-95
chromosome	Hs	cellular component	333	7.83e-103
cytoplasm	Hs	cellular component	660	0.0
Golgi apparatus	Hs	cellular component	660	0.0
plasma membrane	Hs	cellular component	660	0.0
caveola	Hs	cellular component	660	0.0
cilium	Hs	cellular component	660	0.0
drug binding	Hs	molecular function	660	0.0
methyltransferase activity	Hs	molecular function	333	7.83e-103
zinc ion binding	Hs	molecular function	333	7.83e-103
S-adenosylmethionine-dependent methyltransferase activity	Hs	molecular function	312	4.53e-95
membrane	Hs	cellular component	660	0.0
integral component of membrane	Hs	cellular component	660	0.0
transferase activity	Hs	molecular function	333	7.83e-103
Wnt-protein binding	Hs	molecular function	660	0.0
histone-lysine N-methyltransferase activity	Hs	molecular function	333	7.83e-103
endocytic vesicle membrane	Hs	cellular component	660	0.0
rDNA heterochromatin	Hs	cellular component	312	4.53e-95
histone methyltransferase activity	Hs	molecular function	312	4.53e-95
cell projection	Hs	cellular component	660	0.0
intracellular membrane-bounded organelle	Hs	cellular component	660	0.0
metal ion binding	Hs	molecular function	333	7.83e-103
histone methyltransferase activity (H3-K9 specific)	Hs	molecular function	333	7.83e-103
protein N-terminus binding	Hs	molecular function	312	4.53e-95
ciliary membrane	Hs	cellular component	660	0.0
extracellular exosome	Hs	cellular component	660	0.0
ciliary tip	Hs	cellular component	660	0.0
S-adenosyl-L-methionine binding	Hs	molecular function	333	7.83e-103

GO (InterProScan)

10 results

GO Term	Analysis	Type	e-value
transmembrane signaling receptor activity	ProSiteProfiles	molecular function	24.544
protein binding	SMART	molecular function	1.1E-39
nucleus	Pfam	cellular component	6.7E-19
cell surface receptor signaling pathway	SMART	biological process	1.3E-116
smoothened signaling pathway	PANTHER	biological process	1.9E-246
zinc ion binding	Pfam	molecular function	6.7E-19
membrane	SMART	cellular component	1.3E-116
integral component of membrane	ProSiteProfiles	cellular component	24.544
histone-lysine N-methyltransferase activity	Pfam	molecular function	6.7E-19
histone lysine methylation	Pfam	biological process	6.7E-19