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GENE CARD

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Gene Card

Best human hits

DNA2; IGHMBP2; UPF1

Species

B.leachii

Unique Gene ID

Boleac.g00002012

Gene Model ID

Boleac.CG.SB_v3.S127.g02012

Location

S127:237173..240242

Transcript Models and Sequences

  Boleac.CG.SB_v3.S127.g02012.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
AAA+_ATPase SMART AAA+ ATPase domain
R3H_dom ProSiteProfiles R3H domain
Znf_AN1 Pfam Zinc finger, AN1-type
R3H_dom_sf Gene3D R3H domain superfamily
Znf_AN1 SMART Zinc finger, AN1-type
R3H_dom SMART R3H domain
AN1-like_Znf SUPERFAMILY AN1-like Zinc finger
SMUBP-2/Hcs1-like TIGRFAM Helicase SMUBP-2/Hcs1-like
Znf_AN1 ProSiteProfiles Zinc finger, AN1-type
AN1-like_Znf Gene3D AN1-like Zinc finger
R3H_dom_sf SUPERFAMILY R3H domain superfamily
R3H_dom Pfam R3H domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
tRNA binding Hs molecular function
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
DNA helicase activity Hs molecular function
single-stranded DNA binding Hs molecular function
RNA binding Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
DNA replication Hs biological process
DNA repair Hs biological process
DNA recombination Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
translation Hs biological process
DNA-dependent ATPase activity Hs molecular function
transcription factor binding Hs molecular function
RNA-dependent ATPase activity Hs molecular function
zinc ion binding Hs molecular function
membrane Hs cellular component
hydrolase activity Hs molecular function
axon Hs cellular component
growth cone Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
DNA duplex unwinding Hs biological process
ATP-dependent 5'-3' RNA helicase activity Hs molecular function
cell projection Hs cellular component
ribosome binding Hs molecular function
ATP-dependent 5'-3' DNA helicase activity Hs molecular function
metal ion binding Hs molecular function
protein homooligomerization Hs biological process

GO (Blast)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
tRNA binding Hs molecular function 646 0.0
nucleotide binding Hs molecular function 646 0.0
nuclear chromosome, telomeric region Hs cellular component 190 2.39e-49
chromatin Hs cellular component 190 2.39e-49
P-body Hs cellular component 190 2.39e-49
nucleic acid binding Hs molecular function 646 0.0
DNA binding Hs molecular function 646 0.0
DNA helicase activity Hs molecular function 646 0.0
chromatin binding Hs molecular function 190 2.39e-49
single-stranded DNA binding Hs molecular function 646 0.0
RNA binding Hs molecular function 646 0.0
catalytic activity Hs molecular function 176 8.31e-45
ATP-dependent RNA helicase activity Hs molecular function 190 2.39e-49
helicase activity Hs molecular function 646 0.0
nuclease activity Hs molecular function 176 8.31e-45
endonuclease activity Hs molecular function 176 8.31e-45
protein binding Hs molecular function 646 0.0
ATP binding Hs molecular function 646 0.0
nucleus Hs cellular component 646 0.0
nucleoplasm Hs cellular component 190 2.39e-49
cytoplasm Hs cellular component 646 0.0
mitochondrion Hs cellular component 176 8.31e-45
gamma DNA polymerase complex Hs cellular component 176 8.31e-45
cytosol Hs cellular component 190 2.39e-49
DNA-dependent ATPase activity Hs molecular function 646 0.0
transcription factor binding Hs molecular function 646 0.0
RNA-dependent ATPase activity Hs molecular function 646 0.0
zinc ion binding Hs molecular function 646 0.0
membrane Hs cellular component 646 0.0
hydrolase activity Hs molecular function 646 0.0
ATPase activity Hs molecular function 176 8.31e-45
site-specific endodeoxyribonuclease activity, specific for altered base Hs molecular function 176 8.31e-45
5'-flap endonuclease activity Hs molecular function 176 8.31e-45
axon Hs cellular component 646 0.0
growth cone Hs cellular component 646 0.0
intracellular ribonucleoprotein complex Hs cellular component 646 0.0
ATP-dependent 5'-3' RNA helicase activity Hs molecular function 646 0.0
exon-exon junction complex Hs cellular component 190 2.39e-49
telomeric DNA binding Hs molecular function 190 2.39e-49
mitochondrial nucleoid Hs cellular component 176 8.31e-45
cell projection Hs cellular component 646 0.0
ribosome binding Hs molecular function 646 0.0
5'-3' DNA helicase activity Hs molecular function 176 8.31e-45
ATP-dependent 5'-3' DNA helicase activity Hs molecular function 646 0.0
single-stranded DNA-dependent ATPase activity Hs molecular function 176 8.31e-45
supraspliceosomal complex Hs cellular component 190 2.39e-49
metal ion binding Hs molecular function 646 0.0
iron-sulfur cluster binding Hs molecular function 176 8.31e-45
4 iron, 4 sulfur cluster binding Hs molecular function 176 8.31e-45

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleic acid binding Gene3D molecular function 1.1E-11
ATP binding TIGRFAM molecular function 6.9E-188
zinc ion binding Pfam molecular function 1.4E-8

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