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GENE CARD

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Gene Card

Best human hits

KDM8; LRWD1; TYW5

Species

B.leachii

Unique Gene ID

Boleac.g00001236

Gene Model ID

Boleac.CG.SB_v3.S113.g01236

Location

S113:270412..273019

Transcript Models and Sequences

  Boleac.CG.SB_v3.S113.g01236.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat ProSiteProfiles WD40 repeat
JmjC_dom SMART JmjC domain
WD40_repeat SMART WD40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
JmjC_dom ProSiteProfiles JmjC domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
chromosome, centromeric region Hs cellular component
kinetochore Hs cellular component
condensed chromosome kinetochore Hs cellular component
chromosome, telomeric region Hs cellular component
chromatin binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nuclear origin of replication recognition complex Hs cellular component
chromosome Hs cellular component
pericentric heterochromatin Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
microtubule organizing center Hs cellular component
cytoskeleton Hs cellular component
DNA replication Hs biological process
DNA replication initiation Hs biological process
chromatin organization Hs biological process
methyl-CpG binding Hs molecular function
telomeric heterochromatin Hs cellular component
methylated histone binding Hs molecular function
intracellular membrane-bounded organelle Hs cellular component
establishment of protein localization to chromatin Hs biological process

GO (Blast)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 103 3.38e-24
chromosome, centromeric region Hs cellular component 186 4.20e-50
kinetochore Hs cellular component 186 4.20e-50
condensed chromosome kinetochore Hs cellular component 186 4.20e-50
chromosome, telomeric region Hs cellular component 186 4.20e-50
chromatin binding Hs molecular function 186 4.20e-50
iron ion binding Hs molecular function 103 3.38e-24
protein binding Hs molecular function 186 4.20e-50
nucleus Hs cellular component 186 4.20e-50
nucleoplasm Hs cellular component 91.7 2.25e-19
nuclear origin of replication recognition complex Hs cellular component 186 4.20e-50
chromosome Hs cellular component 186 4.20e-50
pericentric heterochromatin Hs cellular component 186 4.20e-50
nucleolus Hs cellular component 186 4.20e-50
cytoplasm Hs cellular component 186 4.20e-50
microtubule organizing center Hs cellular component 186 4.20e-50
cytosol Hs cellular component 91.7 2.25e-19
cytoskeleton Hs cellular component 186 4.20e-50
peptidase activity Hs molecular function 91.7 2.25e-19
methyl-CpG binding Hs molecular function 186 4.20e-50
oxidoreductase activity Hs molecular function 103 3.38e-24
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function 103 3.38e-24
hydrolase activity Hs molecular function 91.7 2.25e-19
telomeric heterochromatin Hs cellular component 186 4.20e-50
histone demethylase activity Hs molecular function 91.7 2.25e-19
methylated histone binding Hs molecular function 186 4.20e-50
protein homodimerization activity Hs molecular function 103 3.38e-24
intracellular membrane-bounded organelle Hs cellular component 186 4.20e-50
metal ion binding Hs molecular function 103 3.38e-24
dioxygenase activity Hs molecular function 103 3.38e-24
histone demethylase activity (H3-K36 specific) Hs molecular function 91.7 2.25e-19
tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity Hs molecular function 103 3.38e-24

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 2.93E-26