Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boleac.CG.SB_v3.S104...'

Gene Card

Best human hits

PCF11; RPRD1A

Species

B.leachii

Unique Gene ID

Boleac.g00000650

Gene Model ID

Boleac.CG.SB_v3.S104.g00650

Location

S104:141585..152273

Transcript Models and Sequences

  Boleac.CG.SB_v3.S104.g00650.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
CID_dom ProSiteProfiles CID domain
ENTH_VHS SUPERFAMILY ENTH/VHS
RNA_pol_II-bd Pfam RNA polymerase II-binding domain
CID_dom SMART CID domain
ENTH_VHS Gene3D ENTH/VHS

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core binding Hs molecular function 209 2.39e-54
mRNA binding Hs molecular function 209 2.39e-54
protein binding Hs molecular function 47.8 2.95e-05
nucleus Hs cellular component 209 2.39e-54
nucleoplasm Hs cellular component 209 2.39e-54
cytoplasm Hs cellular component 209 2.39e-54
mitochondrion Hs cellular component 209 2.39e-54
mRNA cleavage factor complex Hs cellular component 209 2.39e-54
DNA-directed RNA polymerase II, holoenzyme Hs cellular component 47.8 2.95e-05

GO (InterProScan)

No result

GO Term Analysis Type e-value