Aniseed - Gene card

Gene 'Boleac.CG.SB_v3.S101...'

Gene Card

Best human hits

BARHL1; BARHL2; NKX1-2

Species

B.leachii

Unique Gene ID

Boleac.g00000430

Gene Model ID

Boleac.CG.SB_v3.S101.g00430

Location

S101:32972..33983

Transcript Models and Sequences

Boleac.CG.SB_v3.S101.g00430.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_metazoa	PRINTS	Homeobox domain, metazoa
Homeobox_dom	Pfam	Homeobox domain
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox_dom	SMART	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	CDD	Homeobox domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
neuron migration	Hs	biological process
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
sensory perception of sound	Hs	biological process
midbrain development	Hs	biological process
negative regulation of neuron apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	90.1	1.31e-20
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	90.1	1.31e-20
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	90.1	1.31e-20
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	90.1	1.31e-20
DNA binding	Hs	molecular function	90.1	1.31e-20
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	87.8	1.79e-19
protein binding	Hs	molecular function	87.8	1.79e-19
nucleus	Hs	cellular component	90.1	1.31e-20
sequence-specific DNA binding	Hs	molecular function	90.1	1.31e-20

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	1.2E-25
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function