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GENE CARD

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Gene Card

Best human hits

MEX3B; MEX3C; MEX3D

Species

P.mammillata

Unique Gene ID

Phmamm.g00011404

Gene Model ID

Phmamm.CG.MTP2014.S711.g11404

Location

S711:38321..42785

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

67 results

AHC0AAA17YK14

Plate: Plate_17_K14

AHC0AAA23YB13

Plate: Plate_23_B13

AHC0AAA3YJ22

Plate: Plate_3_J22

AHC0AAA5YK21

Plate: Plate_5_K21

AHC0AAA29YG20

Plate: Plate_29_G20

AHC0AAA38YA15

Plate: Plate_38_A15

AHC0AAA42YB23

Plate: Plate_42_B23

AHC0AAA50YC13

Plate: Plate_50_C13

AHC0AAA50YO17

Plate: Plate_50_O17

AHC0AAA55YC17

Plate: Plate_55_C17

AHC0AAA55YK20

Plate: Plate_55_K20

AHC0AAA64YC23

Plate: Plate_64_C23

AHC0AAA64YE23

Plate: Plate_64_E23

AHC0AAA65YN17

Plate: Plate_65_N17

AHC0AAA69YO21

Plate: Plate_69_O21

AHC0AAA73YC06

Plate: Plate_73_C06

AHC0AAA75YF23

Plate: Plate_75_F23

AHC0AAA76YB18

Plate: Plate_76_B18

AHC0AAA79YP14

Plate: Plate_79_P14

AHC0AAA106YA03

Plate: Plate_106_A03

AHC0AAA109YI10

Plate: Plate_109_I10

AHC0AAA111YP13

Plate: Plate_111_P13

AHC0AAA117YD16

Plate: Plate_117_D16

AHC0AAA120YB10

Plate: Plate_120_B10

AHC0AAA128YJ20

Plate: Plate_128_J20

AHC0AAA130YD17

Plate: Plate_130_D17

AHC0AAA132YE06

Plate: Plate_132_E06

AHC0AAA132YH23

Plate: Plate_132_H23

AHC0AAA132YP02

Plate: Plate_132_P02

AHC0AAA138YG06

Plate: Plate_138_G06

AHC0AAA139YF05

Plate: Plate_139_F05

AHC0AAA140YP19

Plate: Plate_140_P19

AHC0AAA150YG11

Plate: Plate_150_G11

AHC0AAA150YP15

Plate: Plate_150_P15

AHC0AAA152YH18

Plate: Plate_152_H18

AHC0AAA84YD18

Plate: Plate_84_D18

AHC0AAA93YJ13

Plate: Plate_93_J13

AHC0AAA120YD12

Plate: Plate_120_D12

AHC0AAA158YC13

Plate: Plate_158_C13

AHC0AAA178YA24

Plate: Plate_178_A24

AHC0AAA183YC09

Plate: Plate_183_C09

AHC0AAA187YG02

Plate: Plate_187_G02

AHC0AAA187YN19

Plate: Plate_187_N19

AHC0AAA188YB23

Plate: Plate_188_B23

AHC0AAA188YI03

Plate: Plate_188_I03

AHC0AAA193YA08

Plate: Plate_193_A08

AHC0AAA194YB05

Plate: Plate_194_B05

AHC0AAA201YE14

Plate: Plate_201_E14

AHC0AAA210YA12

Plate: Plate_210_A12

AHC0AAA210YC07

Plate: Plate_210_C07

AHC0AAA211YG14

Plate: Plate_211_G14

AHC0AAA215YJ24

Plate: Plate_215_J24

AHC0AAA224YH12

Plate: Plate_224_H12

AHC0AAA227YF24

Plate: Plate_227_F24

AHC0AAA228YJ01

Plate: Plate_228_J01

AHC0AAA231YF21

Plate: Plate_231_F21

AHC0AAA232YB22

Plate: Plate_232_B22

AHC0AAA236YD18

Plate: Plate_236_D18

AHC0AAA248YO04

Plate: Plate_248_O04

AHC0AAA260YO07

Plate: Plate_260_O07

AHC0AAA260YP06

Plate: Plate_260_P06

AHC0AAA261YH18

Plate: Plate_261_H18

AHC0AAA263YF19

Plate: Plate_263_F19

AHC0AAA266YM22

Plate: Plate_266_M22

AHC0AAA38YA13

Plate: Plate_38_A13

AHC0AAA55YE19

Plate: Plate_55_E19

AHC0AAA55YK18

Plate: Plate_55_K18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
KH_dom SMART K Homology domain
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING SMART Zinc finger, RING-type
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
Znf_RING ProSiteProfiles Zinc finger, RING-type
KH_dom_type_1 Pfam K Homology domain, type 1
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily

GOSlim

18 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
protein phosphorylation Orthology biological process
transferase activity Orthology molecular function
protein autophosphorylation Orthology biological process
metal ion binding Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
regulation of gene expression Orthology biological process
mRNA catabolic process Orthology biological process

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
P-body Hs cellular component
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
protein phosphorylation Hs biological process
mRNA localization resulting in posttranscriptional regulation of gene expression Hs biological process
transferase activity Hs molecular function
AU-rich element binding Hs molecular function
protein autophosphorylation Hs biological process
metal ion binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
mRNA destabilization Hs biological process
energy homeostasis Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 323 1.17e-103
nucleic acid binding Hs molecular function 323 1.17e-103
RNA binding Hs molecular function 323 1.17e-103
calcium ion binding Hs molecular function 323 1.17e-103
protein binding Hs molecular function 301 6.58e-94
nucleus Hs cellular component 323 1.17e-103
nucleoplasm Hs cellular component 323 1.17e-103
cytoplasm Hs cellular component 323 1.17e-103
cytosol Hs cellular component 323 1.17e-103
transferase activity Hs molecular function 301 6.58e-94
AU-rich element binding Hs molecular function 291 2.56e-90
metal ion binding Hs molecular function 323 1.17e-103
perinuclear region of cytoplasm Hs cellular component 291 2.56e-90

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 1.9E-16
RNA binding Gene3D molecular function 2.9E-21