Aniseed - Gene card

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Genoscope Yasuo Villefranche

4 results

AHC0AAA237YN08

Plate: Plate_237_N08

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Alpha-catenin/vinculin-like_sf	SUPERFAMILY	Alpha-catenin/vinculin-like superfamily
I/LWEQ_dom_sf	SUPERFAMILY	I/LWEQ domain superfamily
ILWEQ_dom	ProSiteProfiles	I/LWEQ domain
ILWEQ_dom	SMART	I/LWEQ domain
Vinculin-bd_dom	Pfam	Vinculin-binding site-containing domain
ILWEQ_dom	ProDom	I/LWEQ domain
Talin1/2-RS	CDD	Talin-1/2, rod-segment
ILWEQ_dom	Pfam	I/LWEQ domain

GOSlim

51 results

GO Term	Annotation Origin	Type
actin binding	Orthology	molecular function
integrin binding	Orthology	molecular function
structural molecule activity	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
nucleus	Blast	cellular component
cytoplasm	Orthology	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
cell adhesion	Orthology	biological process
cell surface	Orthology	cellular component
endomembrane system	Blast	cellular component
membrane	Orthology	cellular component
cell junction	Orthology	cellular component
cytoplasmic vesicle	Blast	cellular component
protein homodimerization activity	Blast	molecular function
cell projection	Orthology	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
synapse	Orthology	cellular component
protein heterodimerization activity	Blast	molecular function
actin filament binding	Orthology	molecular function
membrane organization	Orthology	biological process
extracellular exosome	Orthology	cellular component
postsynapse	Blast	cellular component
plasma membrane region	Orthology	cellular component
cell leading edge	Orthology	cellular component
anion binding	Orthology	molecular function
organelle organization	Orthology	biological process
cell	Orthology	cellular component
cellular protein localization	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
cytoskeletal protein binding	Orthology	molecular function
cell projection membrane	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
blood coagulation	Orthology	biological process
cellular process	Orthology	biological process
receptor binding	Blast	molecular function
whole membrane	Blast	cellular component
plasma membrane part	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
macromolecular complex	Blast	cellular component
intracellular organelle part	Blast	cellular component
intracellular part	Blast	cellular component
macromolecular complex binding	Blast	molecular function
synapse part	Blast	cellular component
neuron part	Blast	cellular component
synaptic membrane	Blast	cellular component
postsynaptic membrane	Blast	cellular component

GO (Orthology)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ruffle	Hs	cellular component
phosphatidylserine binding	Hs	molecular function
platelet degranulation	Hs	biological process
actin binding	Hs	molecular function
integrin binding	Hs	molecular function
structural molecule activity	Hs	molecular function
structural constituent of cytoskeleton	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
muscle contraction	Hs	biological process
cytoskeletal anchoring at plasma membrane	Hs	biological process
cell-cell junction assembly	Hs	biological process
cell-substrate junction assembly	Hs	biological process
cell adhesion	Hs	biological process
integrin-mediated signaling pathway	Hs	biological process
cell surface	Hs	cellular component
actin cytoskeleton	Hs	cellular component
membrane	Hs	cellular component
viral process	Hs	biological process
vinculin binding	Hs	molecular function
cell junction	Hs	cellular component
LIM domain binding	Hs	molecular function
cortical actin cytoskeleton organization	Hs	biological process
ruffle membrane	Hs	cellular component
phosphatidylinositol binding	Hs	molecular function
cell projection	Hs	cellular component
synapse	Hs	cellular component
cadherin binding	Hs	molecular function
actin filament binding	Hs	molecular function
extracellular exosome	Hs	cellular component
platelet aggregation	Hs	biological process

GO (Blast)

51 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ruffle	Hs	cellular component	1214	0.0
phosphatidylserine binding	Hs	molecular function	1207	0.0
actin binding	Hs	molecular function	1214	0.0
epidermal growth factor receptor binding	Hs	molecular function	100	3.66e-21
integrin binding	Hs	molecular function	1207	0.0
structural molecule activity	Hs	molecular function	1214	0.0
structural constituent of cytoskeleton	Hs	molecular function	1214	0.0
protein binding	Hs	molecular function	1214	0.0
phospholipid binding	Hs	molecular function	100	3.66e-21
extracellular region	Hs	cellular component	1207	0.0
nucleus	Hs	cellular component	100	3.66e-21
cytoplasm	Hs	cellular component	1214	0.0
Golgi apparatus	Hs	cellular component	100	3.66e-21
cytosol	Hs	cellular component	1207	0.0
cytoskeleton	Hs	cellular component	1214	0.0
plasma membrane	Hs	cellular component	1214	0.0
focal adhesion	Hs	cellular component	1214	0.0
cell surface	Hs	cellular component	1207	0.0
endomembrane system	Hs	cellular component	100	3.66e-21
actin cytoskeleton	Hs	cellular component	1214	0.0
membrane	Hs	cellular component	1214	0.0
vinculin binding	Hs	molecular function	1207	0.0
cell junction	Hs	cellular component	1214	0.0
AP-2 adaptor complex	Hs	cellular component	100	3.66e-21
clathrin-coated vesicle	Hs	cellular component	100	3.66e-21
LIM domain binding	Hs	molecular function	1207	0.0
clathrin binding	Hs	molecular function	100	3.66e-21
clathrin-coated vesicle membrane	Hs	cellular component	100	3.66e-21
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component	100	3.66e-21
cytoplasmic vesicle	Hs	cellular component	100	3.66e-21
clathrin light chain binding	Hs	molecular function	100	3.66e-21
phosphatidylinositol-3-phosphate binding	Hs	molecular function	100	3.66e-21
ruffle membrane	Hs	cellular component	1207	0.0
phosphatidylinositol binding	Hs	molecular function	1207	0.0
glutamate receptor binding	Hs	molecular function	100	3.66e-21
AP-2 adaptor complex binding	Hs	molecular function	100	3.66e-21
clathrin adaptor activity	Hs	molecular function	100	3.66e-21
protein homodimerization activity	Hs	molecular function	100	3.66e-21
cell projection	Hs	cellular component	1207	0.0
intracellular membrane-bounded organelle	Hs	cellular component	100	3.66e-21
phosphatidylinositol-3,4-bisphosphate binding	Hs	molecular function	100	3.66e-21
synapse	Hs	cellular component	1214	0.0
cadherin binding	Hs	molecular function	1207	0.0
protein heterodimerization activity	Hs	molecular function	100	3.66e-21
actin filament binding	Hs	molecular function	1214	0.0
extracellular exosome	Hs	cellular component	1207	0.0
phosphatidylinositol-3,5-bisphosphate binding	Hs	molecular function	100	3.66e-21
presynapse	Hs	cellular component	100	3.66e-21
postsynapse	Hs	cellular component	100	3.66e-21
extrinsic component of presynaptic membrane	Hs	cellular component	100	3.66e-21
extrinsic component of postsynaptic membrane	Hs	cellular component	100	3.66e-21

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
actin binding	SMART	molecular function	1.7E-84
cell adhesion	SUPERFAMILY	biological process	1.96E-24
actin filament binding	SUPERFAMILY	molecular function	1.96E-24

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