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GENE CARD

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Gene Card

Best human hits

POU2F1; POU2F2; POU2F3

Species

P.mammillata

Unique Gene ID

Phmamm.g00010176

Gene Model ID

Phmamm.CG.MTP2014.S571.g10176

Location

S571:89629..98863

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S571.g10176.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA53YA01

Plate: Plate_53_A01

AHC0AAA76YK24

Plate: Plate_76_K24

AHC0AAA89YD08

Plate: Plate_89_D08

AHC0AAA181YK24

Plate: Plate_181_K24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
POU PRINTS POU domain
POU_dom Pfam POU-specific domain
POU_dom ProSitePatterns POU-specific domain
Homeobox_CS ProSitePatterns Homeobox, conserved site
Lambda_DNA-bd_dom_sf SUPERFAMILY Lambda repressor-like, DNA-binding domain superfamily
Homeobox_dom ProSiteProfiles Homeobox domain
Homeobox_dom SMART Homeobox domain
Homeobox_dom CDD Homeobox domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_dom Pfam Homeobox domain
POU_dom SMART POU-specific domain
POU_dom ProSiteProfiles POU-specific domain

GOSlim

15 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
intracellular membrane-bounded organelle Blast cellular component
sequence-specific DNA binding Blast molecular function
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
nuclear part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 218 2.32e-65
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 208 7.54e-59
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 218 2.32e-65
transcription factor activity, RNA polymerase II core promoter sequence-specific Hs molecular function 208 7.54e-59
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 218 2.32e-65
DNA binding Hs molecular function 218 2.32e-65
transcription factor activity, sequence-specific DNA binding Hs molecular function 218 2.32e-65
protein binding Hs molecular function 218 2.32e-65
nucleus Hs cellular component 218 2.32e-65
nucleoplasm Hs cellular component 210 1.27e-60
cytoplasm Hs cellular component 210 1.27e-60
endoplasmic reticulum Hs cellular component 208 7.54e-59
protein domain specific binding Hs molecular function 210 1.27e-60
intracellular membrane-bounded organelle Hs cellular component 210 1.27e-60
sequence-specific DNA binding Hs molecular function 218 2.32e-65
RNA polymerase II transcription factor complex Hs cellular component 208 7.54e-59

GO (InterProScan)

4 results

GO Term Analysis Type e-value
DNA binding PRINTS molecular function 1.2E-35
transcription factor activity, sequence-specific DNA binding SMART molecular function 4.6E-45
regulation of transcription, DNA-templated SMART biological process 4.6E-45
sequence-specific DNA binding ProSitePatterns molecular function