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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'
  2. Gene 'Phmamm.CG.MTP2014.S4...'

Gene Card

Best human hits

LRRC34; NOD1; SLITRK4

Species

P.mammillata

Unique Gene ID

Phmamm.g00018509

Gene Model ID

Phmamm.CG.MTP2014.S4667.g18509

Location

S4667:105..1616

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S4667.g18509.01.t

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Leu-rich_rpt Pfam Leucine-rich repeat

GOSlim

20 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
enzyme binding Blast molecular function
positive regulation of apoptotic process Blast biological process
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 38.9 0.002
protein binding Hs molecular function 38.9 0.002
ATP binding Hs molecular function 38.9 0.002
nucleus Hs cellular component 37.7 0.004
nucleolus Hs cellular component 37.7 0.004
cytoplasm Hs cellular component 38.9 0.002
cytosol Hs cellular component 38.9 0.002
plasma membrane Hs cellular component 38.9 0.002
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 38.9 0.002
membrane Hs cellular component 38.9 0.002
integral component of membrane Hs cellular component 37.7 0.004
basolateral plasma membrane Hs cellular component 38.9 0.002
apical plasma membrane Hs cellular component 38.9 0.002
identical protein binding Hs molecular function 38.9 0.002
protein homodimerization activity Hs molecular function 38.9 0.002
peptidoglycan binding Hs molecular function 38.9 0.002
CARD domain binding Hs molecular function 38.9 0.002

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 0.0014