Aniseed - Gene card

Gene Card

Best human hits

SLC31A1; SLC31A2

Species

P.mammillata

Unique Gene ID

Phmamm.g00007496

Gene Model ID

Phmamm.CG.MTP2014.S339.g07496

Location

S339:25436..31436

Transcript Models and Sequences

Phmamm.CG.MTP2014.S339.g07496.01.t
Phmamm.CG.MTP2014.S339.g07496.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

48 results

AHC0AAA92YC16

Plate: Plate_92_C16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
Cop_transporter	PANTHER	Ctr copper transporter
Cop_transporter	Pfam	Ctr copper transporter

GOSlim

10 results

GO Term	Annotation Origin	Type
cytoplasm	Blast	cellular component
plasma membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
identical protein binding	Blast	molecular function
neuronal cell body	Blast	cellular component
metal ion transport	Blast	biological process
transmembrane transport	Blast	biological process
endosome	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
copper ion transmembrane transporter activity	Hs	molecular function	66.2	8.91e-14
cytoplasm	Hs	cellular component	66.2	8.91e-14
late endosome	Hs	cellular component	66.2	8.91e-14
plasma membrane	Hs	cellular component	66.2	8.91e-14
integral component of plasma membrane	Hs	cellular component	66.2	8.91e-14
membrane	Hs	cellular component	66.2	8.91e-14
integral component of membrane	Hs	cellular component	66.2	8.91e-14
identical protein binding	Hs	molecular function	66.2	8.91e-14
neuronal cell body	Hs	cellular component	66.2	8.91e-14
recycling endosome	Hs	cellular component	66.2	8.91e-14

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
copper ion transmembrane transporter activity	PANTHER	molecular function	1.1E-30
integral component of membrane	PANTHER	cellular component	1.1E-30
copper ion transmembrane transport	PANTHER	biological process	1.1E-30