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GENE CARD

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Gene Card

Best human hits

CIITA; NLRC5; NLRP1

Species

P.mammillata

Unique Gene ID

Phmamm.g00017547

Gene Model ID

Phmamm.CG.MTP2014.S3201.g17547

Location

S3201:4994..8425

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S3201.g17547.01.t

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
NACHT_NTPase Pfam NACHT nucleoside triphosphatase
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

26 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
transcription coactivator activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
GTP binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
cytosol Blast cellular component
protein C-terminus binding Blast molecular function
cell surface Blast cellular component
kinase activity Blast molecular function
transferase activity Blast molecular function
enzyme binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
macromolecular complex binding Blast molecular function
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
positive regulation of apoptotic process Blast biological process
nuclear body Blast cellular component
transcription factor binding Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 84.7 7.88e-17
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 84.7 7.88e-17
transcription coactivator activity Hs molecular function 62.4 5.36e-10
protein binding Hs molecular function 84.7 7.88e-17
ATP binding Hs molecular function 84.7 7.88e-17
GTP binding Hs molecular function 62.4 5.36e-10
intracellular Hs cellular component 65.1 9.50e-11
nucleus Hs cellular component 84.7 7.88e-17
nucleoplasm Hs cellular component 65.1 9.50e-11
cytoplasm Hs cellular component 84.7 7.88e-17
centrosome Hs cellular component 84.7 7.88e-17
cytosol Hs cellular component 84.7 7.88e-17
protein C-terminus binding Hs molecular function 62.4 5.36e-10
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 65.1 9.50e-11
cell surface Hs cellular component 62.4 5.36e-10
kinase activity Hs molecular function 62.4 5.36e-10
PML body Hs cellular component 62.4 5.36e-10
transferase activity Hs molecular function 62.4 5.36e-10
transferase activity, transferring acyl groups Hs molecular function 62.4 5.36e-10
enzyme binding Hs molecular function 65.1 9.50e-11
protein domain specific binding Hs molecular function 65.1 9.50e-11
activating transcription factor binding Hs molecular function 62.4 5.36e-10
transcription regulatory region DNA binding Hs molecular function 62.4 5.36e-10
macromolecular complex binding Hs molecular function 62.4 5.36e-10
inflammasome complex Hs cellular component 65.1 9.50e-11
NLRP1 inflammasome complex Hs cellular component 65.1 9.50e-11

GO (InterProScan)

No result

GO Term Analysis Type e-value