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GENE CARD

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Gene Card

Best human hits

ATG4B; ATG4C; ATG4D

Species

P.mammillata

Unique Gene ID

Phmamm.g00004702

Gene Model ID

Phmamm.CG.MTP2014.S172.g04702

Location

S172:177977..182705

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

17 results

AHC0AAA14YO01

Plate: Plate_14_O01

AHC0AAA7YO02

Plate: Plate_7_O02

AHC0AAA67YJ02

Plate: Plate_67_J02

AHC0AAA70YP09

Plate: Plate_70_P09

AHC0AAA103YK14

Plate: Plate_103_K14

AHC0AAA104YN11

Plate: Plate_104_N11

AHC0AAA137YO12

Plate: Plate_137_O12

AHC0AAA146YB08

Plate: Plate_146_B08

AHC0AAA165YJ05

Plate: Plate_165_J05

AHC0AAA168YD17

Plate: Plate_168_D17

AHC0AAA194YP20

Plate: Plate_194_P20

AHC0AAA204YP21

Plate: Plate_204_P21

AHC0AAA205YM17

Plate: Plate_205_M17

AHC0AAA206YO04

Plate: Plate_206_O04

AHC0AAA207YG06

Plate: Plate_207_G06

AHC0AAA207YJ16

Plate: Plate_207_J16

AHC0AAA241YH01

Plate: Plate_241_H01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Peptidase_C54 Pfam Peptidase C54
Peptidase_C54 PANTHER Peptidase C54

GOSlim

18 results

GO Term Annotation Origin Type
endopeptidase activity Orthology molecular function
protein binding Blast molecular function
extracellular region Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial matrix Orthology cellular component
cytosol Orthology cellular component
proteolysis Orthology biological process
protein targeting to membrane Orthology biological process
apoptotic process Orthology biological process
peptidase activity Orthology molecular function
protein transport Orthology biological process
hydrolase activity Orthology molecular function
ubiquitin-like protein transferase activity Orthology molecular function
ligase activity Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
organelle organization Orthology biological process
cellular protein modification process Orthology biological process

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
autophagosome assembly Hs biological process
autophagy of mitochondrion Hs biological process
cysteine-type endopeptidase activity Hs molecular function
extracellular region Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
cytosol Hs cellular component
C-terminal protein lipidation Hs biological process
proteolysis Hs biological process
protein targeting to membrane Hs biological process
autophagy Hs biological process
apoptotic process Hs biological process
peptidase activity Hs molecular function
cysteine-type peptidase activity Hs molecular function
protein transport Hs biological process
hydrolase activity Hs molecular function
autophagy of nucleus Hs biological process
protein delipidation Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
endopeptidase activity Hs molecular function 160 1.23e-44
cysteine-type endopeptidase activity Hs molecular function 229 1.31e-69
protein binding Hs molecular function 160 1.23e-44
extracellular region Hs cellular component 170 1.22e-47
cytoplasm Hs cellular component 229 1.31e-69
mitochondrion Hs cellular component 229 1.31e-69
mitochondrial matrix Hs cellular component 229 1.31e-69
cytosol Hs cellular component 229 1.31e-69
peptidase activity Hs molecular function 229 1.31e-69
cysteine-type peptidase activity Hs molecular function 229 1.31e-69
hydrolase activity Hs molecular function 229 1.31e-69

GO (InterProScan)

No result

GO Term Analysis Type e-value