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GENE CARD

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Gene Card

Best human hits

LOXL2; LOXL3; LOXL4

Species

P.mammillata

Unique Gene ID

Phmamm.g00004678

Gene Model ID

Phmamm.CG.MTP2014.S171.g04678

Location

S171:81103..83346

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S171.g04678.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
SRCR-like_dom_sf SUPERFAMILY SRCR-like domain superfamily
SRCR-like_dom_sf Gene3D SRCR-like domain superfamily
SRCR-like_dom SMART SRCR-like domain
SRCR ProSiteProfiles SRCR domain
SRCR Pfam SRCR domain
SRCR ProSitePatterns SRCR domain
SRCR PRINTS SRCR domain

GOSlim

21 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
membrane Blast cellular component
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
extracellular exosome Blast cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
catalytic activity Blast molecular function
membrane organization Blast biological process
organelle organization Blast biological process
transition metal ion binding Blast molecular function
extracellular region part Blast cellular component
cellular metabolic process Blast biological process
macromolecular complex Blast cellular component
binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromatin Hs cellular component 171 7.30e-48
fibronectin binding Hs molecular function 162 8.08e-45
protein-lysine 6-oxidase activity Hs molecular function 171 7.30e-48
scavenger receptor activity Hs molecular function 171 5.50e-48
copper ion binding Hs molecular function 171 5.50e-48
protein binding Hs molecular function 171 5.50e-48
extracellular region Hs cellular component 171 5.50e-48
proteinaceous extracellular matrix Hs cellular component 171 7.30e-48
basement membrane Hs cellular component 171 7.30e-48
extracellular space Hs cellular component 171 5.50e-48
nucleus Hs cellular component 171 7.30e-48
nucleoplasm Hs cellular component 171 7.30e-48
chromosome Hs cellular component 171 7.30e-48
cytoplasm Hs cellular component 162 8.08e-45
endoplasmic reticulum Hs cellular component 171 7.30e-48
electron carrier activity Hs molecular function 171 7.30e-48
membrane Hs cellular component 171 5.50e-48
oxidoreductase activity Hs molecular function 171 5.50e-48
oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor Hs molecular function 171 5.50e-48
extracellular matrix Hs cellular component 171 7.30e-48
receptor complex Hs cellular component 171 5.50e-48
metal ion binding Hs molecular function 171 5.50e-48
extracellular exosome Hs cellular component 171 5.50e-48
oligosaccharide binding Hs molecular function 171 7.30e-48

GO (InterProScan)

2 results

GO Term Analysis Type e-value
scavenger receptor activity Pfam molecular function 4.3E-21
membrane Gene3D cellular component 1.0E-27