Gene Card
Best human hits
RUFY1; RUFY2; RUFY3
Species
Unique Gene ID
Phmamm.g00003354
Gene Model ID
Phmamm.CG.MTP2014.S107.g03354
Location
S107:207943..218636
Transcript Models and Sequences
Genoscope Yasuo Villefranche
12 results
AHC0AAA12YC20
Plate: Plate_12_C20
AHC0AAA16YI16
Plate: Plate_16_I16
AHC0AAA37YP23
Plate: Plate_37_P23
AHC0AAA43YL10
Plate: Plate_43_L10
AHC0AAA65YP21
Plate: Plate_65_P21
AHC0AAA138YB05
Plate: Plate_138_B05
AHC0AAA145YL22
Plate: Plate_145_L22
AHC0AAA194YH19
Plate: Plate_194_H19
AHC0AAA220YB04
Plate: Plate_220_B04
AHC0AAA232YH14
Plate: Plate_232_H14
AHC0AAA237YI01
Plate: Plate_237_I01
AHC0AAA242YK06
Plate: Plate_242_K06
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Run_dom | Pfam | RUN domain |
| Znf_FYVE | SMART | FYVE zinc finger |
| Run_dom_sf | SUPERFAMILY | RUN domain superfamily |
| Run_dom | ProSiteProfiles | RUN domain |
| Znf_FYVE-rel | ProSiteProfiles | Zinc finger, FYVE-related |
| Znf_FYVE_PHD | SUPERFAMILY | Zinc finger, FYVE/PHD-type |
| Run_dom | SMART | RUN domain |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| Znf_FYVE | Pfam | FYVE zinc finger |
GOSlim
34 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| endosome | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| multicellular organism development | Orthology | biological process |
| nervous system development | Orthology | biological process |
| endomembrane system | Orthology | cellular component |
| protein transport | Orthology | biological process |
| membrane | Orthology | cellular component |
| nuclear speck | Orthology | cellular component |
| lamellipodium | Orthology | cellular component |
| cell junction | Orthology | cellular component |
| cell differentiation | Orthology | biological process |
| axon | Orthology | cellular component |
| cell projection | Orthology | cellular component |
| intracellular membrane-bounded organelle | Orthology | cellular component |
| metal ion binding | Orthology | molecular function |
| cellular biosynthetic process | Orthology | biological process |
| phosphate-containing compound metabolic process | Orthology | biological process |
| membrane organization | Orthology | biological process |
| organelle organization | Orthology | biological process |
| binding | Orthology | molecular function |
| plasma membrane region | Orthology | cellular component |
| cytoskeletal part | Orthology | cellular component |
| cell migration | Orthology | biological process |
| cell projection part | Orthology | cellular component |
| whole membrane | Orthology | cellular component |
| intracellular organelle part | Orthology | cellular component |
| early endosome | Orthology | cellular component |
| bounding membrane of organelle | Orthology | cellular component |
| neuronal cell body | Orthology | cellular component |
| axonogenesis | Orthology | biological process |
| intracellular protein transport | Orthology | biological process |
GO (Orthology)
37 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| endosome | Hs | cellular component |
| cytosol | Hs | cellular component |
| phosphatidylinositol biosynthetic process | Hs | biological process |
| endocytosis | Hs | biological process |
| actin filament organization | Hs | biological process |
| multicellular organism development | Hs | biological process |
| nervous system development | Hs | biological process |
| lipid binding | Hs | molecular function |
| protein transporter activity | Hs | molecular function |
| endomembrane system | Hs | cellular component |
| protein transport | Hs | biological process |
| membrane | Hs | cellular component |
| nuclear speck | Hs | cellular component |
| SH3 domain binding | Hs | molecular function |
| lamellipodium | Hs | cellular component |
| cell junction | Hs | cellular component |
| regulation of endocytosis | Hs | biological process |
| cell differentiation | Hs | biological process |
| filopodium | Hs | cellular component |
| positive regulation of cell migration | Hs | biological process |
| axon | Hs | cellular component |
| dendrite | Hs | cellular component |
| growth cone | Hs | cellular component |
| early endosome membrane | Hs | cellular component |
| SH2 domain binding | Hs | molecular function |
| cell projection | Hs | cellular component |
| perikaryon | Hs | cellular component |
| intracellular membrane-bounded organelle | Hs | cellular component |
| positive regulation of axon extension | Hs | biological process |
| metal ion binding | Hs | molecular function |
| negative regulation of axonogenesis | Hs | biological process |
| invadopodium | Hs | cellular component |
| positive regulation of intracellular protein transport | Hs | biological process |
| regulation of establishment of cell polarity | Hs | biological process |
GO (Blast)
24 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| protein binding | Hs | molecular function | 488 | 9.55e-164 |
| nucleus | Hs | cellular component | 532 | 0.0 |
| cytoplasm | Hs | cellular component | 532 | 0.0 |
| endosome | Hs | cellular component | 532 | 0.0 |
| cytosol | Hs | cellular component | 488 | 9.55e-164 |
| lipid binding | Hs | molecular function | 488 | 9.55e-164 |
| protein transporter activity | Hs | molecular function | 488 | 9.55e-164 |
| endomembrane system | Hs | cellular component | 403 | 4.88e-132 |
| membrane | Hs | cellular component | 488 | 9.55e-164 |
| nuclear speck | Hs | cellular component | 488 | 9.55e-164 |
| SH3 domain binding | Hs | molecular function | 532 | 0.0 |
| lamellipodium | Hs | cellular component | 403 | 4.88e-132 |
| cell junction | Hs | cellular component | 403 | 4.88e-132 |
| filopodium | Hs | cellular component | 403 | 4.88e-132 |
| axon | Hs | cellular component | 403 | 4.88e-132 |
| dendrite | Hs | cellular component | 403 | 4.88e-132 |
| growth cone | Hs | cellular component | 403 | 4.88e-132 |
| early endosome membrane | Hs | cellular component | 488 | 9.55e-164 |
| SH2 domain binding | Hs | molecular function | 488 | 9.55e-164 |
| cell projection | Hs | cellular component | 403 | 4.88e-132 |
| perikaryon | Hs | cellular component | 403 | 4.88e-132 |
| intracellular membrane-bounded organelle | Hs | cellular component | 488 | 9.55e-164 |
| metal ion binding | Hs | molecular function | 532 | 0.0 |
| invadopodium | Hs | cellular component | 403 | 4.88e-132 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| metal ion binding | SMART | molecular function | 1.5E-26 |
