Aniseed - Gene card

Gene Card

Best human hits

ILF2; STRBP; ZFR

Species

M.oculata

Unique Gene ID

Moocul.g00006848

Gene Model ID

Moocul.CG.ELv1_2.S88005.g06848

Location

S88005:2972..6528

Transcript Models and Sequences

Moocul.CG.ELv1_2.S88005.g06848.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
DZF_dom	SMART	DZF domain
DZF_dom	Pfam	DZF domain
DZF_dom	ProSiteProfiles	DZF domain
2-5-oligoadenylate_synth_N	ProSiteProfiles	2-5-oligoadenylate synthetase, N-terminal

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
double-stranded RNA binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
extracellular region	Hs	cellular component
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
immune response	Hs	biological process
membrane	Hs	cellular component
transferase activity	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
specific granule lumen	Hs	cellular component
positive regulation of transcription, DNA-templated	Hs	biological process
tertiary granule lumen	Hs	cellular component
ficolin-1-rich granule lumen	Hs	cellular component

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	88.2	3.86e-19
DNA binding	Hs	molecular function	359	1.69e-123
RNA binding	Hs	molecular function	359	1.69e-123
double-stranded RNA binding	Hs	molecular function	359	1.69e-123
single-stranded RNA binding	Hs	molecular function	93.6	5.05e-21
protein binding	Hs	molecular function	359	1.69e-123
ATP binding	Hs	molecular function	359	1.69e-123
extracellular region	Hs	cellular component	359	1.69e-123
nucleus	Hs	cellular component	359	1.69e-123
chromosome	Hs	cellular component	88.2	3.86e-19
nucleolus	Hs	cellular component	359	1.69e-123
cytoplasm	Hs	cellular component	359	1.69e-123
zinc ion binding	Hs	molecular function	88.2	3.86e-19
microtubule cytoskeleton	Hs	cellular component	93.6	5.05e-21
membrane	Hs	cellular component	359	1.69e-123
transferase activity	Hs	molecular function	359	1.69e-123
intracellular ribonucleoprotein complex	Hs	cellular component	359	1.69e-123
specific granule lumen	Hs	cellular component	359	1.69e-123
tertiary granule lumen	Hs	cellular component	359	1.69e-123
ficolin-1-rich granule lumen	Hs	cellular component	359	1.69e-123

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
RNA binding	ProSiteProfiles	molecular function	15.627
ATP binding	ProSiteProfiles	molecular function	15.627
immune response	ProSiteProfiles	biological process	15.627
transferase activity	ProSiteProfiles	molecular function	15.627