Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. > 
  4. > 

Gene Card

Best human hits

DNMT1; KDM2B; TRDMT1

Species

M.occidentalis

Unique Gene ID

Moocci.g00028240

Gene Model ID

Moocci.CG.ELv1_2.S637148.g28240

Location

S637148:15401..20021

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S637148.g28240.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
BAH_dom ProSiteProfiles Bromo adjacent homology (BAH) domain
C5_meth_CS ProSitePatterns DNA methylase, C-5 cytosine-specific, conserved site
Cytosine_MeTrfase1_RFD Pfam DNA (cytosine-5)-methyltransferase 1, replication foci domain
SAM-dependent_MTases SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferase
BAH_dom Pfam Bromo adjacent homology (BAH) domain
C5_DNA_meth_AS ProSitePatterns DNA methylase, C-5 cytosine-specific, active site
C5_MeTfrase PRINTS C-5 cytosine methyltransferase
BAH_dom SMART Bromo adjacent homology (BAH) domain
Znf_CXXC Pfam Zinc finger, CXXC-type
C5_MeTfrase Pfam C-5 cytosine methyltransferase
DNMT1-like PIRSF DNA (cytosine-5)-methyltransferase 1-like
Znf_CXXC ProSiteProfiles Zinc finger, CXXC-type
C5_MeTfrase ProSiteProfiles C-5 cytosine methyltransferase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
heterochromatin Hs cellular component
DNA binding Hs molecular function
chromatin binding Hs molecular function
RNA binding Hs molecular function
DNA (cytosine-5-)-methyltransferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
replication fork Hs cellular component
pericentric heterochromatin Hs cellular component
DNA methylation Hs biological process
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
Ras protein signal transduction Hs biological process
methyltransferase activity Hs molecular function
zinc ion binding Hs molecular function
methyl-CpG binding Hs molecular function
DNA-methyltransferase activity Hs molecular function
maintenance of DNA methylation Hs biological process
regulation of gene expression Hs biological process
positive regulation of gene expression Hs biological process
gene silencing Hs biological process
transferase activity Hs molecular function
methylation Hs biological process
DNA methylation on cytosine Hs biological process
regulation of cell proliferation Hs biological process
DNA methylation involved in embryo development Hs biological process
negative regulation of gene expression, epigenetic Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
metal ion binding Hs molecular function
positive regulation of histone H3-K4 methylation Hs biological process
cellular response to amino acid stimulus Hs biological process
C-5 methylation of cytosine Hs biological process
positive regulation of methylation-dependent chromatin silencing Hs biological process
promoter-specific chromatin binding Hs molecular function

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
heterochromatin Hs cellular component 1455 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 57.0 8.46e-08
DNA binding Hs molecular function 1455 0.0
chromatin binding Hs molecular function 1455 0.0
RNA binding Hs molecular function 1455 0.0
DNA (cytosine-5-)-methyltransferase activity Hs molecular function 1455 0.0
protein binding Hs molecular function 1455 0.0
nucleus Hs cellular component 1455 0.0
nucleoplasm Hs cellular component 1455 0.0
replication fork Hs cellular component 1455 0.0
pericentric heterochromatin Hs cellular component 1455 0.0
nucleolus Hs cellular component 57.0 8.46e-08
cytoplasm Hs cellular component 53.5 4.97e-07
methyltransferase activity Hs molecular function 1455 0.0
tRNA methyltransferase activity Hs molecular function 53.5 4.97e-07
zinc ion binding Hs molecular function 1455 0.0
methyl-CpG binding Hs molecular function 1455 0.0
DNA-methyltransferase activity Hs molecular function 1455 0.0
tRNA (cytosine-5-)-methyltransferase activity Hs molecular function 53.5 4.97e-07
oxidoreductase activity Hs molecular function 57.0 8.46e-08
transferase activity Hs molecular function 1455 0.0
rRNA binding Hs molecular function 57.0 8.46e-08
PcG protein complex Hs cellular component 57.0 8.46e-08
histone demethylase activity Hs molecular function 57.0 8.46e-08
metal ion binding Hs molecular function 1455 0.0
dioxygenase activity Hs molecular function 57.0 8.46e-08
histone demethylase activity (H3-K36 specific) Hs molecular function 57.0 8.46e-08
promoter-specific chromatin binding Hs molecular function 1455 0.0

GO (InterProScan)

7 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 1.5E-12
chromatin binding SMART molecular function 1.7E-21
DNA (cytosine-5-)-methyltransferase activity PIRSF molecular function 0.0
nucleus PIRSF cellular component 0.0
methyltransferase activity Pfam molecular function 2.2E-51
zinc ion binding Pfam molecular function 1.5E-12
C-5 methylation of cytosine PIRSF biological process 0.0

Back to Top