Aniseed - Gene card

Gene Card

Best human hits

DMRT1; DMRTA1; DMRTA2

Species

M.occidentalis

Unique Gene ID

Moocci.g00026272

Gene Model ID

Moocci.CG.ELv1_2.S619951.g26272

Location

S619951:14910..17253

Transcript Models and Sequences

Moocci.CG.ELv1_2.S619951.g26272.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
DMA	Pfam	DMRTA motif
DM_DNA-bd	Pfam	DM DNA-binding domain
DMRT/dsx/mab-3	PANTHER	DMRT/protein doublesex/protein male abnormal 3
DM_DNA-bd_sf	SUPERFAMILY	DM DNA-binding domain superfamily
DM_DNA-bd	SMART	DM DNA-binding domain
DM_DNA-bd	ProSiteProfiles	DM DNA-binding domain
DM_DNA-bd	ProSitePatterns	DM DNA-binding domain
DM_DNA-bd_sf	Gene3D	DM DNA-binding domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
ovarian follicle development	Hs	biological process
positive regulation of neuroblast proliferation	Hs	biological process
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
brain development	Hs	biological process
skeletal muscle cell differentiation	Hs	biological process
protein homodimerization activity	Hs	molecular function
sequence-specific DNA binding	Hs	molecular function
metal ion binding	Hs	molecular function
protein heterodimerization activity	Hs	molecular function
neuron fate specification	Hs	biological process
male mating behavior	Hs	biological process
dopaminergic neuron differentiation	Hs	biological process

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	121	1.64e-30
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	163	8.28e-45
core promoter proximal region sequence-specific DNA binding	Hs	molecular function	121	1.64e-30
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	121	1.64e-30
DNA binding	Hs	molecular function	163	8.28e-45
chromatin binding	Hs	molecular function	121	1.64e-30
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	163	8.28e-45
protein binding	Hs	molecular function	163	8.28e-45
nucleus	Hs	cellular component	163	8.28e-45
cytoplasm	Hs	cellular component	121	1.64e-30
identical protein binding	Hs	molecular function	121	1.64e-30
protein homodimerization activity	Hs	molecular function	163	8.28e-45
sequence-specific DNA binding	Hs	molecular function	163	8.28e-45
metal ion binding	Hs	molecular function	163	8.28e-45
protein heterodimerization activity	Hs	molecular function	161	6.96e-44

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	3.9E-62
nucleus	PANTHER	cellular component	3.9E-62
regulation of transcription, DNA-templated	PANTHER	biological process	3.9E-62
sequence-specific DNA binding	SMART	molecular function	7.3E-30