Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

RPS28

Species

M.occidentalis

Unique Gene ID

Moocci.g00015529

Gene Model ID

Moocci.CG.ELv1_2.S464789.g15529

Location

S464789:8983..9190

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S464789.g15529.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
NA-bd_OB-fold SUPERFAMILY Nucleic acid-binding, OB-fold
Ribosomal_S28e ProDom Ribosomal protein S28e
Ribosomal_S28e Pfam Ribosomal protein S28e
Ribosomal_S28e CDD Ribosomal protein S28e
Ribosomal_S28e PANTHER Ribosomal protein S28e
Ribosomal_S28e_CS ProSitePatterns Ribosomal protein S28e conserved site
Ribosomal_S28e Hamap Ribosomal protein S28e

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal small subunit assembly Hs biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
cytoplasmic translation Hs biological process
RNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
rough endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
small ribosomal subunit Hs cellular component
cytosolic small ribosomal subunit Hs cellular component
maturation of SSU-rRNA Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
ribosome biogenesis Hs biological process
ribosomal small subunit biogenesis Hs biological process
polysomal ribosome Hs cellular component
extracellular exosome Hs cellular component
cytoplasmic side of rough endoplasmic reticulum membrane Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 117 4.89e-37
structural constituent of ribosome Hs molecular function 117 4.89e-37
protein binding Hs molecular function 117 4.89e-37
intracellular Hs cellular component 117 4.89e-37
nucleoplasm Hs cellular component 117 4.89e-37
cytoplasm Hs cellular component 117 4.89e-37
endoplasmic reticulum Hs cellular component 117 4.89e-37
rough endoplasmic reticulum Hs cellular component 117 4.89e-37
cytosol Hs cellular component 117 4.89e-37
ribosome Hs cellular component 117 4.89e-37
small ribosomal subunit Hs cellular component 117 4.89e-37
cytosolic small ribosomal subunit Hs cellular component 117 4.89e-37
intracellular ribonucleoprotein complex Hs cellular component 117 4.89e-37
polysomal ribosome Hs cellular component 117 4.89e-37
extracellular exosome Hs cellular component 117 4.89e-37
cytoplasmic side of rough endoplasmic reticulum membrane Hs cellular component 117 4.89e-37

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome PANTHER molecular function 1.6E-40
intracellular PANTHER cellular component 1.6E-40
ribosome PANTHER cellular component 1.6E-40
translation PANTHER biological process 1.6E-40