Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phfumi.CG.MTP2014.S2...'

Gene Card

Best human hits

ASCL5; FIGLA; SCX

Species

M.occidentalis

Unique Gene ID

Moocci.g00009257

Gene Model ID

Moocci.CG.ELv1_2.S344395.g09257

Location

S344395:17579..19965

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S344395.g09257.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
bHLH_dom Pfam Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf Gene3D Helix-loop-helix DNA-binding domain superfamily
bHLH_dom SMART Myc-type, basic helix-loop-helix (bHLH) domain
MASH1/Ascl1a-like PANTHER Achaete-scute transcription factor-related
bHLH_dom ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom CDD Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf SUPERFAMILY Helix-loop-helix DNA-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 50.1 1.59e-07
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 50.1 2.25e-07
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 52.4 2.94e-08
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 50.1 2.25e-07
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 50.1 2.25e-07
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 52.4 2.94e-08
DNA binding Hs molecular function 52.4 2.94e-08
transcription factor activity, sequence-specific DNA binding Hs molecular function 50.1 1.59e-07
nucleus Hs cellular component 52.4 2.94e-08
transcription factor complex Hs cellular component 52.4 2.94e-08
transcription factor binding Hs molecular function 50.1 2.25e-07
bHLH transcription factor binding Hs molecular function 52.4 2.94e-08
sequence-specific DNA binding Hs molecular function 52.4 2.94e-08
protein heterodimerization activity Hs molecular function 52.4 2.94e-08
protein dimerization activity Hs molecular function 52.4 2.94e-08
E-box binding Hs molecular function 52.4 2.94e-08
RNA polymerase II transcription factor complex Hs cellular component 50.1 1.59e-07

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding PANTHER molecular function 9.1E-24
regulation of transcription from RNA polymerase II promoter PANTHER biological process 9.1E-24
protein dimerization activity Gene3D molecular function 3.5E-18