Aniseed - Gene card

GENE CARD

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Gene Card

Best human hits

B3GALT1; B3GALT2; B3GALT5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00014460

Gene Model ID

KH2012:KH.S406.21

Location

KhS406:1683..4450

Transcript Models and Sequences

KH2012:KH.S406.21.v1.A.nonSL10-1
KH2012:KH.S406.21.v1.A.nonSL11-1
KH2012:KH.S406.21.v1.A.nonSL12-1
KH2012:KH.S406.21.v1.A.nonSL2-1
KH2012:KH.S406.21.v1.A.nonSL3-1
KH2012:KH.S406.21.v1.A.nonSL4-1
KH2012:KH.S406.21.v1.A.nonSL5-1
KH2012:KH.S406.21.v1.A.nonSL6-1
KH2012:KH.S406.21.v1.A.nonSL7-1
KH2012:KH.S406.21.v1.A.nonSL8-1
KH2012:KH.S406.21.v1.A.nonSL9-1
KH2012:KH.S406.21.v1.R.ND1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000018026
NCBI Reference Sequence	XM_002125164.4
NCBI Reference Sequence	XM_018816945.1

Collections

Gateway full ORF

2 results

cien83005

Plate: VES83_I10

cien224169

Plate: VES104_A23

Gene collection 1 (N. Satoh)

1 result

cicl042k20

Plate: R1CiGC12b06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
Glyco_trans_31	Pfam	Glycosyl transferase, family 31
Glyco_trans_31	PANTHER	Glycosyl transferase, family 31

GOSlim

7 results

GO Term	Annotation Origin	Type
Golgi membrane	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
Golgi apparatus	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
transferase activity	Blast	molecular function
cellular protein modification process	InterProScan	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	95.9	2.56e-22
endoplasmic reticulum	Hs	cellular component	94.4	8.76e-22
Golgi apparatus	Hs	cellular component	95.9	2.56e-22
galactosyltransferase activity	Hs	molecular function	95.9	2.56e-22
UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity	Hs	molecular function	95.9	2.56e-22
membrane	Hs	cellular component	95.9	2.56e-22
integral component of membrane	Hs	cellular component	95.9	2.56e-22
transferase activity	Hs	molecular function	95.9	2.56e-22
transferase activity, transferring glycosyl groups	Hs	molecular function	95.9	2.56e-22
glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity	Hs	molecular function	95.9	2.56e-22

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
protein glycosylation	PANTHER	biological process	1.1E-59
galactosyltransferase activity	PANTHER	molecular function	1.1E-59
membrane	PANTHER	cellular component	1.1E-59

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