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Gene Card

Best human hits

MGAM; SI

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011762

Gene Model ID

KH2012:KH.L170.27

Location

KhL170:47871..58359

Transcript Models and Sequences

  KH2012:KH.L170.27.v1.A.ND1-1
KH2012:KH.L170.27.v1.A.nonSL2-1
KH2012:KH.L170.27.v2.A.ND1-1
KH2012:KH.L170.27.v2.A.nonSL2-1
KH2012:KH.L170.27.v3.A.SL3-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000004798
NCBI Reference Sequence XM_018815570.1
NCBI Reference Sequence XM_018815578.1
Collections

Gateway full ORF

2 results

cima874749

Plate: VES67_M13

cima8100120

Plate: VES72_C19

Gene collection 1 (N. Satoh)

1 result

ciht013l16

Plate: R1CiGC43d05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
P_trefoil_dom SMART P-type trefoil domain
Glyco_hydro_b Gene3D Glycosyl hydrolase, all-beta
Gal_mutarotase_sf_dom SUPERFAMILY Galactose mutarotase-like domain superfamily
Gal_mutarotase_N Pfam Galactose mutarotase, N-terminal barrel
P_trefoil_dom ProSiteProfiles P-type trefoil domain
Glyco_hydro_31 Pfam Glycoside hydrolase family 31
P_trefoil_dom Pfam P-type trefoil domain
Glycoside_hydrolase_SF SUPERFAMILY Glycoside hydrolase superfamily
Glyco_hydro_31_N_dom Pfam Glycoside hydrolase family 31, N-terminal domain
P_trefoil_dom CDD P-type trefoil domain
Glyco_hydro_31_AS ProSitePatterns Glycosyl hydrolases family 31, active site

GOSlim

17 results

GO Term Annotation Origin Type
catalytic activity Blast molecular function
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
brush border Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
hydrolase activity Blast molecular function
extracellular exosome Blast cellular component
binding Blast molecular function
cellular metabolic process Blast biological process
organic substance metabolic process Blast biological process
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
catalytic activity Hs molecular function 788 0.0
glucan 1,4-alpha-glucosidase activity Hs molecular function 788 0.0
hydrolase activity, hydrolyzing O-glycosyl compounds Hs molecular function 788 0.0
alpha-1,4-glucosidase activity Hs molecular function 788 0.0
oligo-1,6-glucosidase activity Hs molecular function 746 0.0
sucrose alpha-glucosidase activity Hs molecular function 746 0.0
Golgi apparatus Hs cellular component 746 0.0
plasma membrane Hs cellular component 788 0.0
brush border Hs cellular component 746 0.0
membrane Hs cellular component 788 0.0
integral component of membrane Hs cellular component 788 0.0
amylase activity Hs molecular function 788 0.0
apical plasma membrane Hs cellular component 788 0.0
hydrolase activity Hs molecular function 788 0.0
hydrolase activity, acting on glycosyl bonds Hs molecular function 788 0.0
carbohydrate binding Hs molecular function 788 0.0
maltose alpha-glucosidase activity Hs molecular function 788 0.0
extracellular exosome Hs cellular component 788 0.0
tertiary granule membrane Hs cellular component 788 0.0
alpha-glucosidase activity Hs molecular function 788 0.0
ficolin-1-rich granule membrane Hs cellular component 788 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
catalytic activity SUPERFAMILY molecular function 4.08E-35
hydrolase activity, hydrolyzing O-glycosyl compounds Pfam molecular function 6.5E-150
carbohydrate metabolic process Pfam biological process 6.5E-150
carbohydrate binding SUPERFAMILY molecular function 4.08E-35

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