Aniseed - Gene card

Gene Card

Best human hits

DIRAS1; DIRAS2; RAP1B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008779

Gene Model ID

KH2012:KH.C8.17

Location

KhC8:3708490..3714951

Transcript Models and Sequences

KH2012:KH.C8.17.v1.A.SL2-1
KH2012:KH.C8.17.v2.A.SL1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000007348
NCBI Reference Sequence	XM_002130498.2
NCBI Reference Sequence	XM_018813070.1

Collections

Gene collection 1 (N. Satoh)

1 result

ciad013j22

Plate: R1CiGC02k10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Small_GTPase_Ras	PANTHER	Small GTPase superfamily, Ras type
Small_GTPase_Ras	ProSiteProfiles	Small GTPase superfamily, Ras type
Small_GTPase	Pfam	Small GTPase superfamily
Small_GTP-bd_dom	TIGRFAM	Small GTP-binding protein domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase

GOSlim

20 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
GTPase activity	Orthology	molecular function
protein binding	Blast	molecular function
GTP binding	Orthology	molecular function
intracellular	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Orthology	cellular component
signal transduction	Orthology	biological process
membrane	Orthology	cellular component
cell junction	Blast	cellular component
macromolecular complex binding	Blast	molecular function
extracellular exosome	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
anion binding	Blast	molecular function
guanyl ribonucleotide binding	Blast	molecular function
purine ribonucleoside binding	Blast	molecular function
cytoplasmic vesicle	Blast	cellular component
lysosomal membrane	Blast	cellular component
endomembrane system	Blast	cellular component

GO (Orthology)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
GTPase activity	Hs	molecular function
GTP binding	Hs	molecular function
plasma membrane	Hs	cellular component
signal transduction	Hs	biological process
membrane	Hs	cellular component

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	298	9.30e-104
GTPase activity	Hs	molecular function	298	9.30e-104
protein binding	Hs	molecular function	152	1.82e-46
GTP binding	Hs	molecular function	298	9.30e-104
intracellular	Hs	cellular component	152	1.82e-46
cytoplasm	Hs	cellular component	152	1.82e-46
lipid droplet	Hs	cellular component	152	1.82e-46
cytosol	Hs	cellular component	152	1.82e-46
plasma membrane	Hs	cellular component	298	9.30e-104
cell-cell junction	Hs	cellular component	152	1.82e-46
membrane	Hs	cellular component	298	9.30e-104
GDP binding	Hs	molecular function	152	1.82e-46
cell junction	Hs	cellular component	152	1.82e-46
azurophil granule membrane	Hs	cellular component	152	1.82e-46
macromolecular complex binding	Hs	molecular function	152	1.82e-46
extracellular exosome	Hs	cellular component	152	1.82e-46

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
GTPase activity	Pfam	molecular function	1.1E-45
GTP binding	PANTHER	molecular function	4.6E-95
signal transduction	PANTHER	biological process	4.6E-95
membrane	PANTHER	cellular component	4.6E-95