Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000009340
ENSEMBL	ENSCING00000012243
ENSEMBL	ENSCING00000022932

Collections

Gene collection 1 (N. Satoh)

2 results

cits031g11

Plate: R1CiGC33p06

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
DAG1	Pfam	Dystroglycan
Alpha-dystroglycan_domain_2	SUPERFAMILY	Alpha-dystroglycan domain 2
SEA_DG_dom	ProSiteProfiles	DG-type SEA domain
Cadherin-like	SUPERFAMILY	Cadherin-like
Cadg	SMART	Dystroglycan-type cadherin-like
Alpha-dystroglycan_domain_2	Gene3D	Alpha-dystroglycan domain 2

GOSlim

47 results

GO Term	Annotation Origin	Type
actin binding	Blast	molecular function
calcium ion binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
endoplasmic reticulum lumen	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
focal adhesion	Blast	cellular component
tubulin binding	Blast	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
basolateral plasma membrane	Blast	cellular component
lamellipodium	Blast	cellular component
cell junction	Blast	cellular component
identical protein binding	Blast	molecular function
membrane raft	Blast	cellular component
synapse	Blast	cellular component
postsynaptic membrane	Blast	cellular component
extracellular exosome	Blast	cellular component
binding	Blast	molecular function
extracellular region part	Blast	cellular component
Golgi apparatus part	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
adherens junction	Blast	cellular component
structural molecule activity	Blast	molecular function
plasma membrane part	Blast	cellular component
cell surface	Blast	cellular component
macromolecular complex	Blast	cellular component
cytoskeletal protein binding	Blast	molecular function
plasma membrane region	Blast	cellular component
cell projection	Blast	cellular component
cytoskeletal part	Blast	cellular component
cell projection part	Blast	cellular component
axon	Blast	cellular component
nuclear lumen	Blast	cellular component
cytoplasmic part	Blast	cellular component
organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
cell part	Blast	cellular component
organelle organization	InterProScan	biological process
cell	InterProScan	cellular component
cellular protein localization	InterProScan	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

47 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
virus receptor activity	Hs	molecular function	78.6	1.39e-14
dystroglycan binding	Hs	molecular function	78.6	1.39e-14
actin binding	Hs	molecular function	78.6	1.39e-14
calcium ion binding	Hs	molecular function	78.6	1.39e-14
protein binding	Hs	molecular function	78.6	1.39e-14
extracellular region	Hs	cellular component	78.6	1.39e-14
basement membrane	Hs	cellular component	78.6	1.39e-14
extracellular space	Hs	cellular component	78.6	1.39e-14
nucleus	Hs	cellular component	78.6	1.39e-14
nucleoplasm	Hs	cellular component	78.6	1.39e-14
cytoplasm	Hs	cellular component	78.6	1.39e-14
endoplasmic reticulum lumen	Hs	cellular component	78.6	1.39e-14
Golgi lumen	Hs	cellular component	78.6	1.39e-14
cytosol	Hs	cellular component	78.6	1.39e-14
cytoskeleton	Hs	cellular component	78.6	1.39e-14
plasma membrane	Hs	cellular component	78.6	1.39e-14
cell-cell junction	Hs	cellular component	78.6	1.39e-14
cell-cell adherens junction	Hs	cellular component	78.6	1.39e-14
focal adhesion	Hs	cellular component	78.6	1.39e-14
structural constituent of muscle	Hs	molecular function	78.6	1.39e-14
external side of plasma membrane	Hs	cellular component	78.6	1.39e-14
tubulin binding	Hs	molecular function	78.6	1.39e-14
dystrophin-associated glycoprotein complex	Hs	cellular component	78.6	1.39e-14
dystroglycan complex	Hs	cellular component	78.6	1.39e-14
membrane	Hs	cellular component	78.6	1.39e-14
integral component of membrane	Hs	cellular component	78.6	1.39e-14
basolateral plasma membrane	Hs	cellular component	78.6	1.39e-14
vinculin binding	Hs	molecular function	78.6	1.39e-14
lamellipodium	Hs	cellular component	78.6	1.39e-14
cell junction	Hs	cellular component	78.6	1.39e-14
filopodium	Hs	cellular component	78.6	1.39e-14
extracellular matrix	Hs	cellular component	78.6	1.39e-14
node of Ranvier	Hs	cellular component	78.6	1.39e-14
nuclear periphery	Hs	cellular component	78.6	1.39e-14
SH2 domain binding	Hs	molecular function	78.6	1.39e-14
sarcolemma	Hs	cellular component	78.6	1.39e-14
identical protein binding	Hs	molecular function	78.6	1.39e-14
costamere	Hs	cellular component	78.6	1.39e-14
laminin binding	Hs	molecular function	78.6	1.39e-14
laminin-1 binding	Hs	molecular function	78.6	1.39e-14
plasma membrane raft	Hs	cellular component	78.6	1.39e-14
membrane raft	Hs	cellular component	78.6	1.39e-14
synapse	Hs	cellular component	78.6	1.39e-14
postsynaptic membrane	Hs	cellular component	78.6	1.39e-14
alpha-actinin binding	Hs	molecular function	78.6	1.39e-14
extracellular exosome	Hs	cellular component	78.6	1.39e-14
contractile ring	Hs	cellular component	78.6	1.39e-14

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
calcium ion binding	SUPERFAMILY	molecular function	8.95E-7
cytoskeletal anchoring at plasma membrane	Pfam	biological process	3.2E-9
dystrophin-associated glycoprotein complex	Pfam	cellular component	3.2E-9
membrane	SUPERFAMILY	cellular component	8.95E-7

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences