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Gene Card

Best human hits

CDY1; CDY1B; ECI2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005729

Gene Model ID

KH2012:KH.C3.541

Location

KhC3:2854182..2860087

Transcript Models and Sequences

  KH2012:KH.C3.541.v1.A.ND2-1
KH2012:KH.C3.541.v1.A.nonSL3-1
KH2012:KH.C3.541.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000018025
NCBI Reference Sequence XM_002126560.3
NCBI Reference Sequence XM_009859711.2
Collections

Gateway full ORF

3 results

cima868135

Plate: VES66_A06

cima8102514

Plate: VES73_F07

cien199945

Plate: VES101_M07

Gene collection 1 (N. Satoh)

1 result

cilv026i17

Plate: R1CiGC27e10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
enoyl-CoA_hydra_C Gene3D Enoyl-CoA hydratase, C-terminal
ClpP/crotonase-like_dom_sf SUPERFAMILY ClpP/crotonase-like domain superfamily
Acyl-CoA-binding_prot_CS ProSitePatterns Acyl-CoA-binding protein, ACBP, conserved site
Enoyl-CoA_hydra/iso Pfam Enoyl-CoA hydratase/isomerase
Acyl-CoA-binding_protein PRINTS Acyl-CoA-binding protein, ACBP
Acyl-CoA-binding_sf SUPERFAMILY Acyl-CoA binding protein superfamily
Acyl-CoA-binding_protein ProSiteProfiles Acyl-CoA-binding protein, ACBP
FERM/acyl-CoA-bd_prot_sf Gene3D FERM/acyl-CoA-binding protein superfamily
Acyl-CoA-binding_protein Pfam Acyl-CoA-binding protein, ACBP

GOSlim

19 results

GO Term Annotation Origin Type
catalytic activity Orthology molecular function
receptor binding Orthology molecular function
nucleus Blast cellular component
nucleoplasm Orthology cellular component
mitochondrion Orthology cellular component
peroxisome Orthology cellular component
metabolic process Orthology biological process
membrane Orthology cellular component
transferase activity Blast molecular function
intracellular membrane-bounded organelle Orthology cellular component
anion binding Orthology molecular function
adenyl ribonucleotide binding Orthology molecular function
coenzyme binding Orthology molecular function
intracellular organelle part Orthology cellular component
intracellular organelle lumen Orthology cellular component
oxidation-reduction process Orthology biological process
organelle organization Blast biological process
cellular protein modification process Blast biological process
protein binding Blast molecular function

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
fatty-acyl-CoA binding Hs molecular function
catalytic activity Hs molecular function
dodecenoyl-CoA delta-isomerase activity Hs molecular function
receptor binding Hs molecular function
nucleoplasm Hs cellular component
mitochondrion Hs cellular component
peroxisome Hs cellular component
peroxisomal matrix Hs cellular component
fatty acid beta-oxidation Hs biological process
metabolic process Hs biological process
membrane Hs cellular component
isomerase activity Hs molecular function
intramolecular oxidoreductase activity, transposing C=C bonds Hs molecular function
fatty acid beta-oxidation using acyl-CoA oxidase Hs biological process
intracellular membrane-bounded organelle Hs cellular component

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
fatty-acyl-CoA binding Hs molecular function 370 6.52e-127
catalytic activity Hs molecular function 370 6.52e-127
dodecenoyl-CoA delta-isomerase activity Hs molecular function 370 6.52e-127
histone acetyltransferase activity Hs molecular function 195 5.25e-57
receptor binding Hs molecular function 370 6.52e-127
nucleus Hs cellular component 195 5.25e-57
nucleoplasm Hs cellular component 370 6.52e-127
mitochondrion Hs cellular component 370 6.52e-127
peroxisome Hs cellular component 370 6.52e-127
peroxisomal matrix Hs cellular component 370 6.52e-127
membrane Hs cellular component 370 6.52e-127
transferase activity Hs molecular function 195 5.25e-57
transferase activity, transferring acyl groups Hs molecular function 195 5.25e-57
isomerase activity Hs molecular function 370 6.52e-127
intramolecular oxidoreductase activity, transposing C=C bonds Hs molecular function 370 6.52e-127
methylated histone binding Hs molecular function 195 5.25e-57
intracellular membrane-bounded organelle Hs cellular component 370 6.52e-127

GO (InterProScan)

3 results

GO Term Analysis Type e-value
fatty-acyl-CoA binding Pfam molecular function 5.0E-27
catalytic activity Pfam molecular function 7.3E-40
metabolic process Pfam biological process 7.3E-40

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