Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000009883

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cieg044b17

Plate: R1CiGC22j09

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Cation_efflux_TMD_sf	Gene3D	Cation efflux transmembrane domain superfamily
Cation_efflux	TIGRFAM	Cation efflux protein
DNA-bd_dom_put_sf	SUPERFAMILY	Putative DNA-binding domain superfamily
Cation_efflux_TMD_sf	SUPERFAMILY	Cation efflux transmembrane domain superfamily
Cation_efflux	Pfam	Cation efflux protein
XPA_sf	Gene3D	XPA domain superfamily

GOSlim

33 results

GO Term	Annotation Origin	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Blast	molecular function
chromatin binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
cytoskeleton	Orthology	cellular component
DNA repair	Orthology	biological process
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
ion transport	Orthology	biological process
cation transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
protein homodimerization activity	Blast	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Blast	molecular function
transmembrane transport	Orthology	biological process
metal ion transport	Orthology	biological process
cellular process	Orthology	biological process
cell	Orthology	cellular component
receptor binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
transcription coactivator activity	Orthology	molecular function
nuclear part	Blast	cellular component
macromolecular complex	Blast	cellular component
nucleoplasm part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
extracellular region part	Blast	cellular component

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
cytoskeleton	Hs	cellular component
nucleotide-excision repair	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
ion transport	Hs	biological process
cation transport	Hs	biological process
zinc II ion transport	Hs	biological process
cellular zinc ion homeostasis	Hs	biological process
cation transmembrane transporter activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
ligand-dependent nuclear receptor binding	Hs	molecular function
ligand-dependent nuclear receptor transcription coactivator activity	Hs	molecular function
cytoplasmic vesicle	Hs	cellular component
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
transmembrane transport	Hs	biological process
cation transmembrane transport	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide-excision repair factor 1 complex	Hs	cellular component	43.5	1.85e-04
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	477	8.76e-164
DNA binding	Hs	molecular function	43.5	1.85e-04
chromatin binding	Hs	molecular function	477	8.76e-164
damaged DNA binding	Hs	molecular function	43.5	1.85e-04
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	477	8.76e-164
protein binding	Hs	molecular function	43.5	1.85e-04
nucleus	Hs	cellular component	477	8.76e-164
nucleoplasm	Hs	cellular component	43.5	1.85e-04
DNA replication factor A complex	Hs	cellular component	43.5	1.85e-04
cytoplasm	Hs	cellular component	477	8.76e-164
endoplasmic reticulum	Hs	cellular component	477	8.76e-164
cytoskeleton	Hs	cellular component	477	8.76e-164
cation transmembrane transporter activity	Hs	molecular function	477	8.76e-164
membrane	Hs	cellular component	477	8.76e-164
integral component of membrane	Hs	cellular component	477	8.76e-164
ligand-dependent nuclear receptor binding	Hs	molecular function	477	8.76e-164
protein domain specific binding	Hs	molecular function	43.5	1.85e-04
ligand-dependent nuclear receptor transcription coactivator activity	Hs	molecular function	477	8.76e-164
cytoplasmic vesicle	Hs	cellular component	477	8.76e-164
protein homodimerization activity	Hs	molecular function	43.5	1.85e-04
intercellular bridge	Hs	cellular component	43.5	1.85e-04
metal ion binding	Hs	molecular function	43.5	1.85e-04

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
cation transport	TIGRFAM	biological process	7.7E-28
cation transmembrane transporter activity	TIGRFAM	molecular function	7.7E-28
integral component of membrane	TIGRFAM	cellular component	7.7E-28
transmembrane transport	TIGRFAM	biological process	7.7E-28

Gene Card

Best human hits

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Transcript Models and Sequences