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GENE CARD

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Gene Card

Best human hits

MALRD1; MDGA1; MDGA2

Unique Gene ID

Cirobu.g00003617

Gene Model ID

KH2012:KH.C14.201

Location

KhC14:3411771..3422543

External Database Gene Card
Collections

Gateway full ORF

1 result

cima885833

Plate: VES69_H19

Gene collection 1 (N. Satoh)

1 result

citb13l3

Plate: R1CiGC30h05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

18 results

IPR Term Analysis Definition
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
CUB_dom ProSiteProfiles CUB domain
Sperma_CUB_dom_sf SUPERFAMILY Spermadhesin, CUB domain superfamily
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
MAM_dom CDD MAM domain
LDrepeatLR_classA_rpt PRINTS Low-density lipoprotein (LDL) receptor class A repeat
MAM_dom SMART MAM domain
MAM_dom ProSiteProfiles MAM domain
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
Sperma_CUB_dom_sf Gene3D Spermadhesin, CUB domain superfamily
MAM_dom Pfam MAM domain
LDLR_class-A_CS ProSitePatterns Low-density lipoprotein (LDL) receptor class A, conserved site
CUB_dom CDD CUB domain
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
CUB_dom Pfam CUB domain
CUB_dom SMART CUB domain

GOSlim

13 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
intracellular organelle part Blast cellular component
organelle membrane Blast cellular component
intrinsic component of membrane Blast cellular component
intrinsic component of plasma membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 123 2.46e-28
extracellular region Hs cellular component 99.8 2.96e-21
extracellular space Hs cellular component 99.8 2.96e-21
cytoplasm Hs cellular component 123 2.46e-28
Golgi apparatus Hs cellular component 123 2.46e-28
plasma membrane Hs cellular component 99.8 2.96e-21
membrane Hs cellular component 123 2.46e-28
integral component of membrane Hs cellular component 123 2.46e-28
cytoplasmic vesicle membrane Hs cellular component 123 2.46e-28
anchored component of membrane Hs cellular component 99.8 2.96e-21
cytoplasmic vesicle Hs cellular component 123 2.46e-28
anchored component of plasma membrane Hs cellular component 99.8 2.96e-21

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding CDD molecular function 3.1969E-11
membrane CDD cellular component 1.27681E-41