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  3. Gene 'KH2012:KH.C11.478' > 
  4. Gene 'Boleac.CG.SB_v3.S81....' > 

Gene Card

Best human hits

SLC6A2; SLC6A3; SLC6A4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001402

Gene Model ID

KH2012:KH.C10.200

Location

KhC10:4408677..4419112

Transcript Models and Sequences

  KH2012:KH.C10.200.v1.A.SL1-1
KH2012:KH.C10.200.v1.A.SL3-1
KH2012:KH.C10.200.v1.A.SL4-1
KH2012:KH.C10.200.v2.A.nonSL10-1
KH2012:KH.C10.200.v2.A.nonSL5-1
KH2012:KH.C10.200.v2.A.nonSL6-1
KH2012:KH.C10.200.v2.A.nonSL7-1
KH2012:KH.C10.200.v2.A.nonSL8-1
KH2012:KH.C10.200.v2.A.nonSL9-1
KH2012:KH.C10.200.v2.A.SL2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000007757
ENSEMBL ENSCING00000021806
NCBI Reference Sequence XM_018813827.1
Collections

Gateway full ORF

2 results

cima89468

Plate: VES57_J17

cima876351

Plate: VES67_C23

Gene collection 1 (N. Satoh)

1 result

cits033n09

Plate: R1CiGC34a12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Na/ntran_symport Pfam Sodium:neurotransmitter symporter
SNS_sf SUPERFAMILY Sodium:neurotransmitter symporter superfamily
Na/ntran_symport ProSitePatterns Sodium:neurotransmitter symporter
Na/ntran_symport PRINTS Sodium:neurotransmitter symporter
Na/ntran_symport PANTHER Sodium:neurotransmitter symporter
Na/ntran_symport ProSiteProfiles Sodium:neurotransmitter symporter

GOSlim

55 results

GO Term Annotation Origin Type
response to hypoxia Orthology biological process
receptor binding Blast molecular function
protein binding Orthology molecular function
cytoplasm Blast cellular component
endosome Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
chemical synaptic transmission Orthology biological process
brain development Orthology biological process
cell surface Blast cellular component
response to organic substance Orthology biological process
positive regulation of gene expression Orthology biological process
endomembrane system Orthology cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
axon Blast cellular component
protein homodimerization activity Orthology molecular function
neuron projection Orthology cellular component
neuronal cell body Blast cellular component
membrane raft Orthology cellular component
metal ion binding Orthology molecular function
protein N-terminus binding Blast molecular function
actin filament binding Orthology molecular function
protein oligomerization Orthology biological process
protein homooligomerization Orthology biological process
transmembrane transport Orthology biological process
cellular response to organic substance Orthology biological process
sodium ion transport Orthology biological process
organic substance transport Orthology biological process
synapse part Orthology cellular component
neuron part Orthology cellular component
cation transport Orthology biological process
nervous system process Orthology biological process
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
cytoskeletal protein binding Orthology molecular function
enzyme binding Orthology molecular function
cation binding Orthology molecular function
heterocyclic compound binding Orthology molecular function
organic cyclic compound binding Orthology molecular function
response to lipid Orthology biological process
cellular biosynthetic process Orthology biological process
sexual reproduction Orthology biological process
multicellular organismal reproductive process Orthology biological process
cell development Orthology biological process
neuron differentiation Orthology biological process
cell cycle Orthology biological process
developmental process Orthology biological process
anatomical structure morphogenesis Orthology biological process
binding Blast molecular function
plasma membrane region Blast cellular component
macromolecular complex Blast cellular component
tubulin binding Blast molecular function

GO (Orthology)

55 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
response to hypoxia Hs biological process
neurotransmitter:sodium symporter activity Hs molecular function
dopamine:sodium symporter activity Hs molecular function
serotonin:sodium symporter activity Hs molecular function
protein binding Hs molecular function
endosome Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
neurotransmitter transport Hs biological process
serotonin transport Hs biological process
brain development Hs biological process
response to nutrient Hs biological process
memory Hs biological process
circadian rhythm Hs biological process
monoamine transmembrane transporter activity Hs molecular function
response to toxic substance Hs biological process
endosome membrane Hs cellular component
response to organic substance Hs biological process
positive regulation of gene expression Hs biological process
endomembrane system Hs cellular component
serotonin transmembrane transporter activity Hs molecular function
symporter activity Hs molecular function
monoamine transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
myosin binding Hs molecular function
syntaxin-1 binding Hs molecular function
Rab GTPase binding Hs molecular function
cocaine binding Hs molecular function
response to estradiol Hs biological process
social behavior Hs biological process
neurotransmitter biosynthetic process Hs biological process
vasoconstriction Hs biological process
response to drug Hs biological process
sperm ejaculation Hs biological process
protein homodimerization activity Hs molecular function
neuron projection Hs cellular component
membrane raft Hs cellular component
negative regulation of neuron differentiation Hs biological process
positive regulation of cell cycle Hs biological process
negative regulation of organ growth Hs biological process
metal ion binding Hs molecular function
brain morphogenesis Hs biological process
nitric-oxide synthase binding Hs molecular function
actin filament binding Hs molecular function
protein oligomerization Hs biological process
protein homooligomerization Hs biological process
dopamine uptake involved in synaptic transmission Hs biological process
serotonin uptake Hs biological process
transmembrane transport Hs biological process
cellular response to retinoic acid Hs biological process
cellular response to organic substance Hs biological process
cellular response to cGMP Hs biological process
presynapse Hs cellular component

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protease binding Hs molecular function 580 0.0
receptor binding Hs molecular function 580 0.0
neurotransmitter:sodium symporter activity Hs molecular function 667 0.0
dopamine transmembrane transporter activity Hs molecular function 580 0.0
dopamine:sodium symporter activity Hs molecular function 667 0.0
norepinephrine transmembrane transporter activity Hs molecular function 637 0.0
norepinephrine:sodium symporter activity Hs molecular function 637 0.0
serotonin:sodium symporter activity Hs molecular function 667 0.0
protein binding Hs molecular function 667 0.0
cytoplasm Hs cellular component 580 0.0
endosome Hs cellular component 667 0.0
cytosol Hs cellular component 667 0.0
plasma membrane Hs cellular component 667 0.0
integral component of plasma membrane Hs cellular component 667 0.0
drug binding Hs molecular function 580 0.0
monoamine transmembrane transporter activity Hs molecular function 667 0.0
cell surface Hs cellular component 637 0.0
endosome membrane Hs cellular component 667 0.0
endomembrane system Hs cellular component 667 0.0
serotonin transmembrane transporter activity Hs molecular function 667 0.0
symporter activity Hs molecular function 667 0.0
membrane Hs cellular component 667 0.0
integral component of membrane Hs cellular component 667 0.0
flotillin complex Hs cellular component 580 0.0
myosin binding Hs molecular function 667 0.0
syntaxin-1 binding Hs molecular function 667 0.0
Rab GTPase binding Hs molecular function 667 0.0
cocaine binding Hs molecular function 667 0.0
axon Hs cellular component 580 0.0
dopamine binding Hs molecular function 580 0.0
protein homodimerization activity Hs molecular function 667 0.0
neuron projection Hs cellular component 667 0.0
alpha-tubulin binding Hs molecular function 637 0.0
neuronal cell body Hs cellular component 580 0.0
membrane raft Hs cellular component 667 0.0
metal ion binding Hs molecular function 667 0.0
protein N-terminus binding Hs molecular function 580 0.0
beta-tubulin binding Hs molecular function 637 0.0
nitric-oxide synthase binding Hs molecular function 667 0.0
actin filament binding Hs molecular function 667 0.0
protein phosphatase 2A binding Hs molecular function 580 0.0
presynapse Hs cellular component 667 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
neurotransmitter:sodium symporter activity PANTHER molecular function 2.2E-238
neurotransmitter transport PANTHER biological process 2.2E-238
integral component of membrane PANTHER cellular component 2.2E-238

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