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GENE CARD

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Gene Card

Best human hits

DENND1A; DENND1B; DENND1C

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000876

Gene Model ID

KH2012:KH.C1.620

Location

KhC1:2748493..2765248

Transcript Models and Sequences

  KH2012:KH.C1.620.v1.A.SL1-1
KH2012:KH.C1.620.v1.A.SL2-1
KH2012:KH.C1.620.v2.A.SL1-2
KH2012:KH.C1.620.v2.A.SL2-2
KH2012:KH.C1.620.v3.A.SL1-3
KH2012:KH.C1.620.v3.A.SL2-3

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000003894
NCBI Reference Sequence XM_018812009.1
NCBI Reference Sequence XM_018817363.1
Collections

Gateway full ORF

4 results

cien36934

Plate: VES76_O05

cien48885

Plate: VES77_M22

cien114079

Plate: VES88_G05

cien124531

Plate: VES89_C18

Gene collection 1 (N. Satoh)

2 results

citb5a13

Plate: R1CiGC29a20

cieg055o18

Plate: R1CiGC24o24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
cDENN_dom SMART cDENN domain
uDENN_dom Pfam uDENN domain
Tripartite_DENN ProSiteProfiles Tripartite DENN domain
uDENN_dom SMART uDENN domain
cDENN_dom Pfam cDENN domain
dDENN_dom Pfam dDENN domain
dDENN_dom SMART dDENN domain

GOSlim

32 results

GO Term Annotation Origin Type
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
protein transport Orthology biological process
membrane Orthology cellular component
nuclear speck Orthology cellular component
cell junction Orthology cellular component
cytoplasmic vesicle Orthology cellular component
neuronal cell body Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
positive regulation of GTPase activity Orthology biological process
synapse Orthology cellular component
regulation of molecular function Orthology biological process
enzyme binding Orthology molecular function
molecular function regulator Orthology molecular function
membrane organization Orthology biological process
organelle organization Orthology biological process
binding Orthology molecular function
protein binding Orthology molecular function
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
anion binding Orthology molecular function
intracellular transport Orthology biological process
small GTPase mediated signal transduction Orthology biological process
regulation of signal transduction Orthology biological process
immune response Orthology biological process
synaptic membrane Orthology cellular component
neuron part Orthology cellular component
synapse part Orthology cellular component
cell surface receptor signaling pathway Orthology biological process

GO (Orthology)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
guanyl-nucleotide exchange factor activity Hs molecular function
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
endocytosis Hs biological process
lipid binding Hs molecular function
protein transport Hs biological process
membrane Hs cellular component
nuclear speck Hs cellular component
Rab guanyl-nucleotide exchange factor activity Hs molecular function
SH3 domain binding Hs molecular function
Rab GTPase binding Hs molecular function
cell junction Hs cellular component
clathrin-coated vesicle Hs cellular component
dendrite Hs cellular component
clathrin-coated vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
phosphatidylinositol-3-phosphate binding Hs molecular function
endocytic recycling Hs biological process
regulation of Rab protein signal transduction Hs biological process
T-helper 2 cell cytokine production Hs biological process
presynaptic membrane Hs cellular component
neuronal cell body Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
positive regulation of GTPase activity Hs biological process
synapse Hs cellular component
synaptic vesicle endocytosis Hs biological process
regulation of immune response Hs biological process
T cell receptor signaling pathway Hs biological process
regulation of molecular function Hs biological process
phosphatidylinositol phosphate binding Hs molecular function

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
guanyl-nucleotide exchange factor activity Hs molecular function 405 1.77e-126
nucleoplasm Hs cellular component 405 1.77e-126
cytoplasm Hs cellular component 387 4.96e-122
cytosol Hs cellular component 405 1.77e-126
plasma membrane Hs cellular component 405 1.77e-126
lipid binding Hs molecular function 405 1.77e-126
membrane Hs cellular component 405 1.77e-126
nuclear speck Hs cellular component 387 4.96e-122
Rab guanyl-nucleotide exchange factor activity Hs molecular function 405 1.77e-126
SH3 domain binding Hs molecular function 405 1.77e-126
Rab GTPase binding Hs molecular function 405 1.77e-126
cell junction Hs cellular component 405 1.77e-126
clathrin-coated vesicle Hs cellular component 405 1.77e-126
dendrite Hs cellular component 405 1.77e-126
clathrin-coated vesicle membrane Hs cellular component 405 1.77e-126
cytoplasmic vesicle Hs cellular component 405 1.77e-126
phosphatidylinositol-3-phosphate binding Hs molecular function 405 1.77e-126
presynaptic membrane Hs cellular component 405 1.77e-126
neuronal cell body Hs cellular component 405 1.77e-126
intracellular membrane-bounded organelle Hs cellular component 405 1.77e-126
synapse Hs cellular component 405 1.77e-126
phosphatidylinositol phosphate binding Hs molecular function 405 1.77e-126

GO (InterProScan)

No result

GO Term Analysis Type e-value

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