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GENE CARD

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Gene Card

Best human hits

SOX14; SOX2; SOX21

Species

H.aurantium

Unique Gene ID

Haaura.g00011053

Gene Model ID

Haaura.CG.MTP2014.S6151.g11053

Location

S6151:141..1420

Transcript Models and Sequences

  Haaura.CG.MTP2014.S6151.g11053.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
HMG_box_dom_sf SUPERFAMILY High mobility group box domain superfamily
HMG_box_dom ProSiteProfiles High mobility group box domain
HMG_box_dom Pfam High mobility group box domain
HMG_box_dom_sf Gene3D High mobility group box domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
DNA binding Hs molecular function
chromatin binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
nervous system development Hs biological process
visual perception Hs biological process
entrainment of circadian clock Hs biological process
sequence-specific DNA binding Hs molecular function
skin development Hs biological process
nuclear transcription factor complex Hs cellular component
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
protein heterodimerization activity Hs molecular function
stem cell differentiation Hs biological process
regulation of neuron migration Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transcription regulatory region sequence-specific DNA binding Hs molecular function 104 1.33e-26
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 104 4.97e-27
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 120 2.43e-33
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 104 4.97e-27
DNA binding Hs molecular function 120 2.43e-33
chromatin binding Hs molecular function 120 2.43e-33
transcription factor activity, sequence-specific DNA binding Hs molecular function 104 4.97e-27
protein binding Hs molecular function 120 2.43e-33
nucleus Hs cellular component 120 2.43e-33
nucleoplasm Hs cellular component 104 1.33e-26
transcription factor complex Hs cellular component 104 1.33e-26
cytoplasm Hs cellular component 104 1.33e-26
cytosol Hs cellular component 104 1.33e-26
miRNA binding Hs molecular function 104 1.33e-26
sequence-specific DNA binding Hs molecular function 120 2.43e-33
transcription regulatory region DNA binding Hs molecular function 104 1.33e-26
nuclear transcription factor complex Hs cellular component 120 2.43e-33
protein heterodimerization activity Hs molecular function 120 2.43e-33

GO (InterProScan)

No result

GO Term Analysis Type e-value

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