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Gene Card

Best human hits

PSMC1; PSMC3; PSMC4

Species

C.savignyi

Unique Gene ID

Cisavi.g00008747

Gene Model ID

Cisavi.CG.ENS81.R509.34460-41157

Location

R509:34459..41157

Transcript Models and Sequences

  Cisavi.CG.ENS81.R509.34460-41157.05166.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
PSMC3 PANTHER 26S Proteasome regulatory subunit 6A
AAA+_ATPase SMART AAA+ ATPase domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
ATPase_AAA_core Pfam ATPase, AAA-type, core

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

48 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
MAPK cascade Hs biological process
nucleotide binding Hs molecular function
protein polyubiquitination Hs biological process
proteasome complex Hs cellular component
P-body Hs cellular component
protein binding Hs molecular function
ATP binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
proteasome regulatory particle, base subcomplex Hs cellular component
negative regulation of G2/M transition of mitotic cell cycle Hs biological process
membrane Hs cellular component
viral process Hs biological process
protein deubiquitination Hs biological process
hydrolase activity Hs molecular function
ATPase activity Hs molecular function
TBP-class protein binding Hs molecular function
proteasome accessory complex Hs cellular component
protein catabolic process Hs biological process
ubiquitin-dependent ERAD pathway Hs biological process
anaphase-promoting complex-dependent catabolic process Hs biological process
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process Hs biological process
nuclear proteasome complex Hs cellular component
cytosolic proteasome complex Hs cellular component
tumor necrosis factor-mediated signaling pathway Hs biological process
secretory granule lumen Hs cellular component
proteasome-activating ATPase activity Hs molecular function
NIK/NF-kappaB signaling Hs biological process
Fc-epsilon receptor signaling pathway Hs biological process
identical protein binding Hs molecular function
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
regulation of mRNA stability Hs biological process
post-translational protein modification Hs biological process
positive regulation of RNA polymerase II transcriptional preinitiation complex assembly Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
T cell receptor signaling pathway Hs biological process
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle Hs biological process
transmembrane transport Hs biological process
Wnt signaling pathway, planar cell polarity pathway Hs biological process
interleukin-1-mediated signaling pathway Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
positive regulation of canonical Wnt signaling pathway Hs biological process
positive regulation of proteasomal protein catabolic process Hs biological process
regulation of hematopoietic stem cell differentiation Hs biological process
ficolin-1-rich granule lumen Hs cellular component

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 530 0.0
proteasome complex Hs cellular component 530 0.0
P-body Hs cellular component 530 0.0
RNA binding Hs molecular function 236 1.95e-74
protein binding Hs molecular function 530 0.0
ATP binding Hs molecular function 530 0.0
extracellular region Hs cellular component 530 0.0
nucleus Hs cellular component 530 0.0
nucleoplasm Hs cellular component 530 0.0
cytoplasm Hs cellular component 530 0.0
cytosol Hs cellular component 530 0.0
proteasome regulatory particle Hs cellular component 236 1.95e-74
proteasome regulatory particle, base subcomplex Hs cellular component 530 0.0
membrane Hs cellular component 530 0.0
inclusion body Hs cellular component 228 2.44e-71
hydrolase activity Hs molecular function 530 0.0
ATPase activity Hs molecular function 530 0.0
TBP-class protein binding Hs molecular function 530 0.0
proteasome accessory complex Hs cellular component 530 0.0
nuclear proteasome complex Hs cellular component 530 0.0
cytosolic proteasome complex Hs cellular component 530 0.0
secretory granule lumen Hs cellular component 530 0.0
proteasome-activating ATPase activity Hs molecular function 530 0.0
identical protein binding Hs molecular function 530 0.0
synapse Hs cellular component 228 2.44e-71
ficolin-1-rich granule lumen Hs cellular component 530 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
ATP binding Pfam molecular function 5.6E-28
proteasome-activating ATPase activity PANTHER molecular function 2.9E-173

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