Aniseed - Gene card

Gene 'Haaura.CG.MTP2014.S8...' >

Gene Card

Best human hits

FOXI1; FOXI2; FOXI3

Species

C.savignyi

Unique Gene ID

Cisavi.g00004964

Gene Model ID

Cisavi.CG.ENS81.R24.351056-356137

Location

R24:351055..356137

Transcript Models and Sequences

Cisavi.CG.ENS81.R24.351056-356137.10267.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
Fork_head_dom	CDD	Fork head domain
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily
Fork_head_dom	PRINTS	Fork head domain
TF_fork_head_CS_2	ProSitePatterns	Fork head domain conserved site 2
TF_fork_head_CS_1	ProSitePatterns	Fork head domain conserved site1
Fork_head_dom	SMART	Fork head domain
Fork_head_dom	ProSiteProfiles	Fork head domain
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
Fork_head_dom	Pfam	Fork head domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
DNA binding, bending	Hs	molecular function
anatomical structure morphogenesis	Hs	biological process
embryo development ending in birth or egg hatching	Hs	biological process
cell differentiation	Hs	biological process
inner ear morphogenesis	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
sequence-specific DNA binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	231	1.19e-70
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	231	1.19e-70
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	231	1.19e-70
DNA binding	Hs	molecular function	231	1.19e-70
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	231	1.19e-70
nucleus	Hs	cellular component	231	1.19e-70
nucleolus	Hs	cellular component	231	1.19e-70
DNA binding, bending	Hs	molecular function	231	1.19e-70
intracellular membrane-bounded organelle	Hs	cellular component	231	1.19e-70
sequence-specific DNA binding	Hs	molecular function	231	1.19e-70
transcription regulatory region DNA binding	Hs	molecular function	231	1.19e-70

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	1.2E-60
regulation of transcription, DNA-templated	SMART	biological process	1.2E-60
sequence-specific DNA binding	SMART	molecular function	1.2E-60