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GENE CARD

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Gene Card

Best human hits

SNX2; SNX4; SNX7

Species

C.savignyi

Unique Gene ID

Cisavi.g00004791

Gene Model ID

Cisavi.CG.ENS81.R23.698099-700315

Location

R23:698098..700315

Transcript Models and Sequences

  Cisavi.CG.ENS81.R23.698099-700315.00247.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
PX_SNX4 CDD Sorting nexin 4, PX domain
PX_dom_sf Gene3D PX domain superfamily
PX_dom_sf SUPERFAMILY PX domain superfamily
Phox ProSiteProfiles Phox homologous domain
SNX4 PANTHER Sorting nexin-4
Phox SMART Phox homologous domain
Phox Pfam Phox homologous domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
epidermal growth factor receptor binding Hs molecular function
insulin receptor binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
cytoplasmic dynein complex Hs cellular component
plasma membrane Hs cellular component
endocytosis Hs biological process
lipid binding Hs molecular function
protein transport Hs biological process
membrane Hs cellular component
vesicle organization Hs biological process
extrinsic component of membrane Hs cellular component
SNARE complex Hs cellular component
early endosome membrane Hs cellular component
endocytic recycling Hs biological process
macromolecular complex Hs cellular component
phosphatidylinositol binding Hs molecular function
transferrin receptor binding Hs molecular function
leptin receptor binding Hs molecular function

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
epidermal growth factor receptor binding Hs molecular function 200 5.29e-62
insulin receptor binding Hs molecular function 200 5.29e-62
protein binding Hs molecular function 200 5.29e-62
intracellular Hs cellular component 64.3 6.18e-12
cytoplasm Hs cellular component 200 5.29e-62
lysosome Hs cellular component 64.3 6.18e-12
endosome Hs cellular component 200 5.29e-62
cytosol Hs cellular component 64.3 6.18e-12
cytoplasmic dynein complex Hs cellular component 200 5.29e-62
plasma membrane Hs cellular component 200 5.29e-62
lipid binding Hs molecular function 200 5.29e-62
endosome membrane Hs cellular component 64.3 6.18e-12
membrane Hs cellular component 200 5.29e-62
extrinsic component of membrane Hs cellular component 200 5.29e-62
lamellipodium Hs cellular component 64.3 6.18e-12
cytoplasmic vesicle membrane Hs cellular component 65.9 2.04e-12
retromer complex Hs cellular component 64.3 6.18e-12
retromer, tubulation complex Hs cellular component 64.3 6.18e-12
SNARE complex Hs cellular component 200 5.29e-62
cytoplasmic vesicle Hs cellular component 65.9 2.04e-12
early endosome membrane Hs cellular component 200 5.29e-62
macromolecular complex Hs cellular component 200 5.29e-62
phosphatidylinositol binding Hs molecular function 200 5.29e-62
protein homodimerization activity Hs molecular function 64.3 6.18e-12
cell projection Hs cellular component 64.3 6.18e-12
cadherin binding Hs molecular function 64.3 6.18e-12
protein heterodimerization activity Hs molecular function 64.3 6.18e-12
extracellular exosome Hs cellular component 64.3 6.18e-12
transferrin receptor binding Hs molecular function 200 5.29e-62
leptin receptor binding Hs molecular function 200 5.29e-62

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein transport PANTHER biological process 2.0E-71
phosphatidylinositol binding Gene3D molecular function 8.5E-31